Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0424 ATGAATTGGATAGAAAAGCTAATTAAAATGGTGGAAGAAGAAGCGATTTTGGAGAGTAATCTGCACCATCAACTTGCTGTTGAAGAATTCAATTTTGATACTTGTTTATCGTCTTTACACACATATCTTGGTGATGTTGAAGACACGCGTCACAGAACAGCTTTCTTGGATGCTGATTCTGTATTCAATCTTCCTCTCTTTTCTCTTCAAGGAGTTGTACTGTTTCCCGGAGCCACTCTTCCCCTTAGAGTTGTTGAACCCCCTTTCGTGGCTGCTATTGAGAGAGCTTTGGCTCAAGTTGATGTTCCTTACACCATTGGTGTGATTCGAACTCACTGGGACACCGCAAATCGTGGGATGAAATTGGCAAGCATTGGGACAACTGCAGAGATTCGACAATACGTGCGTCTAGAGGATGGTTCACTGAATGTGGTTACTTGTGGACAACAACGATTTCGCCTAAGACGGCGTTGGAGAGATGCAGAAAGAGTGCCTTATGGAGAGATCCAAATTACTGAGGAAGATGTACCATTGAGAACTCCACAAGGTGCTTTTGGAAAATTAGGACCATTGAGTAATCGTCCCCGTAGCCATGCCATCTCACATATGTTGTCTTCAAGAGCATTCTGGCCCCAATGGGTATTTCATATGTTCGATTCTTATTGCCTTGCAGAAAGAGTCGCAGATATGTGGAAGCAAATAGTTGGTGCTCCTAGAATGGATAGCCTTGTTAAGAAGCCTGATGTTTTATCATTTTATATCGCCAGTAAAATACCTGTGTCTGAATCTACAAGGCAGGAACTTTTGGATATTGATGGAATCACATATAGATTGCGCAGGGAAATTGAGTTACTTGCAAGCATTGATCTTATCCGATGTAAAAGCTGCCAGACTATAATTGCAGAACGAAGTGATATGCTGGTGATGTCGAGTGAGGGTCCTCTGGGTGCTTATGTGAATCCGGGTGGTTATGTGCATGAGATAATGACTCTTTACAAGGCAGATGGCATAACTCCTGTTGGGCCATCAGCTACAGAATACAGTTGGTTTCCTGGGTATGCTTGGACAATTGCAAAATGTTCTACATGTAAAACCCAACTGGGGTGGCTTTTTACAGCCACTAAAATAAAACTGAAACCCAGTTCCTTTTGGGGGATACGGAGCTGTCAAGTTGCAGAAGAAATATGCCGAAACCTTTAA 1200 0.4267 MNWIEKLIKMVEEEAILESNLHHQLAVEEFNFDTCLSSLHTYLGDVEDTRHRTAFLDADSVFNLPLFSLQGVVLFPGATLPLRVVEPPFVAAIERALAQVDVPYTIGVIRTHWDTANRGMKLASIGTTAEIRQYVRLEDGSLNVVTCGQQRFRLRRRWRDAERVPYGEIQITEEDVPLRTPQGAFGKLGPLSNRPRSHAISHMLSSRAFWPQWVFHMFDSYCLAERVADMWKQIVGAPRMDSLVKKPDVLSFYIASKIPVSESTRQELLDIDGITYRLRREIELLASIDLIRCKSCQTIIAERSDMLVMSSEGPLGAYVNPGGYVHEIMTLYKADGITPVGPSATEYSWFPGYAWTIAKCSTCKTQLGWLFTATKIKLKPSSFWGIRSCQVAEEICRNL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0424 399 SMART lon_5 63 287 IPR003111 -
Lal21g0424 399 Gene3D - 44 172 IPR046336 -
Lal21g0424 399 PANTHER CEREBLON 23 391 - -
Lal21g0424 399 Gene3D - 219 284 - -
Lal21g0424 399 PANTHER PROTEIN CEREBLON 23 391 - -
Lal21g0424 399 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 291 381 IPR004910 -
Lal21g0424 399 ProSiteProfiles CULT domain profile. 288 395 IPR034750 -
Lal21g0424 399 Pfam ATP-dependent protease La (LON) substrate-binding domain 63 285 IPR003111 -
Lal21g0424 399 Gene3D Peptide methionine sulfoxide reductase. 285 398 - -
Lal21g0424 399 ProSiteProfiles Lon N-terminal domain profile. 64 287 IPR003111 -
Lal21g0424 399 SUPERFAMILY PUA domain-like 63 285 IPR015947 -
Lal21g0424 399 CDD CRBN_C_like 291 387 IPR034750 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0424 Lal-Chr21 2930132 2934149 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0424 K11793 - gmx:100779918 334.339