Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0414 ATGGCTCTTCTCTTCCGAGAACTCTCATTGGGCCATTCCAAGAGAGACACAACACCGCCACCGCCACCAATAATTCCTCCTCCTAAACCCGCCGCCGACAACCTTCCTTCGCCGTTCGGTCAAATTTCCATTAACCTCACCGATCACCAGCTAACCCTAACTGCATACGAGATCTTCGTCGCTGCATGCCGAACCTCCTCCGGGAAGCCACTCACCTTCGTCCCTAATAGCCACTCCGCCGAGTTGCTGACTCAGAACTCACTTAACTCGTTCTCTTATCAGCGATCTTTAACTTACACTGCCGCCAGCAAGGTTAAGAAGGTATTCGGCTTGAATTTGCCCGGTTCGGGTTCTAAACAGAGCCCTGGATCGGGTGGTTCGGGTTCCGGTTCGGGTCAGGGTAAGCCGAAACGGCCTATGACGGTTGGGGAGCTTATGAGGAACCAGATGAGGGTTTCGGAAGCTATGGATTCACGTGTTCGGCGTGCGCTGCTCAGAATTTCTGCTGGACAGGTTGGAAGACGGATTGAGTCAATGGTTGTTCCACTTGAGCTATTGCAGCAGCTTAAGGTTTCGGATTTTGTTGACGAACAAGAGTATGATGAGTGGCAGAAGAGAACCCTGAAGGTTCTAGAAGCTGGTCTTATATTGCATCCTCGCATACCTCTTGACAAGTCGAATTCTGCTGCACAGCGCCTGCGGCAAATTATTCACGGGGCTTTGGATAGGCCTATAGAAACTGGGAGGAATAATGAGTCTATGCAGGTTCTTCGTAGTGCTGTCACATCTCTTGCAAATCGGTCAAATGATGGGTCTCTCTCTGATTCATGCCACTGGGCAGATGGGATTCCTCTCAATCTCCGCCTCTATGAAGTACTTCTACAATCCTGCTTTGATGCTAATGATGATTCATCAATTATTGGGGAATTTGATGAACTGATGGAACAAATCAAGAAGACCTGGGAAATCCTTGGCTTGAACCAAACACTTCATAATATCTGTTTTACTTGGGTTTTATTTCATCGGTTTGTTGCAACTGGCCAGATGGATTTGGAGCTGCTGTCTGCCGCAGATGGCCAGCTAACTGAAGTTGCAAAAGATGCAAAGGTGACAAAGGATTCACAATATTCCAAAATTTTGAGTTCTACATTAACTTCAATAATGGGGTGGGCTGAGAAAAGGCTTCTTGCATATCACGAAACTTTTGATCGCACAAATGTTGGAACAATGGAGGCCATTGTTTCTTTAGGTGTAGCAGCAGCTAAGATTTTGGTTGAAGACATTTCTAATGAGTATCGGCGAAGGAGAAGAACTGAAGTCAATGTGGCCCGTGAAAGAATTGAAACATACATCAGGTCATCACTACGTACTGCTTTTGCTCAGGCAAGTTCTTTTCGTCTTCCATTGGTTTCCCCCATAACATCTCTTGGGCTGGTAATGGAGAAAGCAGATTCATGCAGGAGAGCATCCAAAAATCGACCAAATGCACTCCCTCTCCTTGCCATCCTCGCAAAGGATGTAGGTAGCCTGGCAGTTAATGAAAAGCAAGTGTTCAGCCCAATCCTCAAGAGGTGGCATCCTTTGGCAGCAGGTCTTGCTGTGGCCACCCTTCATGTATGCTATGGAAATGAATTGAAGCAATTCATTTCAGGTATCACAGAATTGACACCTGATGCTGTACAAGTGTTGAGAGCCGCTGATCAGCTGGAGAAAGACCTTGTGCAGATAGCAGTAGAAGATTCAGTGGAAAGTGATGATGGTGGCAAAGCAATAATCCGTGAGATGCCTCCATATGAGGCTGAAGCTGCAATTGCTAATCTGGTGAAAATATGGATTGAGACTAGATTAGACAGATTGGAGGAGTGTGTTGATAGACATCTGCAGCAAGAGCTTTGGAGCCCACAAACTAATCAGAAACGATGTGCCCCATCTGCTGTTGAGGTTTTGCGAATTGTAAATGAAACCTTGGATGCATTCTTTCAGCTTCCAATACCTATGCATCCTGCATTGCTTCCTGAAGTGATCAATGGCCTCGACAGATGCCTTCAGCACTACATAGCCAAAGCAAAATCTAGCTGTGGTTCACGAAATACATTTCTTCCAACCATGCCAGCATTGACCAGATGCACTATTAGCTCTAAGTTTCAAGGCTTTGGGAAGAAAAGGGACAAATTTACAAATTCTCAGAAGAGAAACCCTCAGGTTGCAACAAATGGGGATAACTCTTTCGGGATACCACAACTCTGTGTTCGCATAAATACTTTGCAATGGATCCTGGGTGAATTTGATGTTCTGGAAAAAAGAATAATTACCCTTTTACGAAACTCTGAATCTGCCCATATAGAAGATTTTTCCAATGGATTAGCAAAGAAGTTTGAACTATCTCCAGCCGCATGTCTTGAAGGAATTCAGAAACTTTGTGAGGCAGCAGCATATAGACTTGTCTTCCATGATCTAAGCCATACTTTGTTGGATGGTTTGTATGTTGGGGATCCATCGTCTTCCAGGATTGATCCATTTCTTCAGGAACTGGAGCGGAACTTGCTGTTTGTTTCAGACACAATTCATGAAAAATCCTGCACACGCATTATTACTGAAATAATGAGAGCTTCCTTCGATGGATTCTTGCTTGTATTGCTTGCTGGAGGGCCCTCACGTGCTTTTACCCGGAAGGATTCTCAGATCATAGAGGATGATTTCGAAGTTCTTAAGGAGATGTTTTGGGCAAATGGGGATGGCTTGCCTACTGAGTTGATTGATAAGTTTTCAACTTCTGTGAGATCTGTCCTTCCCCTTTTTAGAACCGAGACAGAGAGCATCATTGAGCAGTTTAGACGTCTAACCATGGAAAGATATAAGTCCAATGCCAGATCCAGACTTCCATTACCTCCAACTTCTGGACAGTGGGATCCATCTGAACCGAACACATTGTTGCGTGTTTTGTGCTACAGAAATGATGAACCGGCTTCTAAATTTCTTAAGAAGACATATGATCTACCTAAGAAACTTTAA 3012 0.4472 MALLFRELSLGHSKRDTTPPPPPIIPPPKPAADNLPSPFGQISINLTDHQLTLTAYEIFVAACRTSSGKPLTFVPNSHSAELLTQNSLNSFSYQRSLTYTAASKVKKVFGLNLPGSGSKQSPGSGGSGSGSGQGKPKRPMTVGELMRNQMRVSEAMDSRVRRALLRISAGQVGRRIESMVVPLELLQQLKVSDFVDEQEYDEWQKRTLKVLEAGLILHPRIPLDKSNSAAQRLRQIIHGALDRPIETGRNNESMQVLRSAVTSLANRSNDGSLSDSCHWADGIPLNLRLYEVLLQSCFDANDDSSIIGEFDELMEQIKKTWEILGLNQTLHNICFTWVLFHRFVATGQMDLELLSAADGQLTEVAKDAKVTKDSQYSKILSSTLTSIMGWAEKRLLAYHETFDRTNVGTMEAIVSLGVAAAKILVEDISNEYRRRRRTEVNVARERIETYIRSSLRTAFAQASSFRLPLVSPITSLGLVMEKADSCRRASKNRPNALPLLAILAKDVGSLAVNEKQVFSPILKRWHPLAAGLAVATLHVCYGNELKQFISGITELTPDAVQVLRAADQLEKDLVQIAVEDSVESDDGGKAIIREMPPYEAEAAIANLVKIWIETRLDRLEECVDRHLQQELWSPQTNQKRCAPSAVEVLRIVNETLDAFFQLPIPMHPALLPEVINGLDRCLQHYIAKAKSSCGSRNTFLPTMPALTRCTISSKFQGFGKKRDKFTNSQKRNPQVATNGDNSFGIPQLCVRINTLQWILGEFDVLEKRIITLLRNSESAHIEDFSNGLAKKFELSPAACLEGIQKLCEAAAYRLVFHDLSHTLLDGLYVGDPSSSRIDPFLQELERNLLFVSDTIHEKSCTRIITEIMRASFDGFLLVLLAGGPSRAFTRKDSQIIEDDFEVLKEMFWANGDGLPTELIDKFSTSVRSVLPLFRTETESIIEQFRRLTMERYKSNARSRLPLPPTSGQWDPSEPNTLLRVLCYRNDEPASKFLKKTYDLPKKL 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0414 1003 PANTHER PROTEIN UNC-13 HOMOLOG 4 1003 IPR008528 -
Lal21g0414 1003 MobiDBLite consensus disorder prediction 114 131 - -
Lal21g0414 1003 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 834 944 IPR014772 -
Lal21g0414 1003 ProSiteProfiles Munc13-homology domain 1 (MHD1) profile. 560 703 IPR014770 -
Lal21g0414 1003 MobiDBLite consensus disorder prediction 113 140 - -
Lal21g0414 1003 MobiDBLite consensus disorder prediction 16 34 - -
Lal21g0414 1003 MobiDBLite consensus disorder prediction 11 38 - -
Lal21g0414 1003 PANTHER ELONGATION FACTOR TS (DUF810) 4 1003 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0414 Lal-Chr21 2877970 2882992 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0414 - - gmx:100814675 1614.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0414 21 2877970 2882992 Lal21g0414 21 2877970 2882992 ECH
Lal21g0414 21 2877970 2882992 Lal4g0286 4 1853245 1858280 LSH