Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0412 ATGGGTCAAGAATTCGAGTCCTTATTTCGGCTGAAAACAAAGAGATTGCTATGGCTTATAGGCATTGCGGTTGCTGCAATTGTAGTATACCATTATTTTGAGTTTCCATATGGTAACAACACTATACCCTATGGATTCTATGTTGATAAGATACCAAAATCAGGAAGTAGTAGATTCCAAGCTGCAGATCCACCATCCGACTCTGAAATATTTAGCAATGTGATAGATTCGAACCAAACTAACTATACCGGAGAAGAACATGGCCTTGAGACAGTTAATAAAACTCGGACTTCTGAGGAAAAAGACACTATTTCAACACCTGATTTTGTCTCAGAACCAGCAATTGTATCGAACATATCTTCAAGATTTGACGAGTCTGATGAAAGGTCCTTGGTGGGTAGTTTTAGGATTTCAAATAACGAATCTGCTGCAGAGCAAGCGCGAAATCTTGAACCGAGCAGTTATAACAATTCTATGGGTATGAGTTATATAAGAGACGCTGCCATTCCATCTGCATCAGAACATAAGTTGGCAGAACCAACAAATTTCGCTCCATCTATAAGTCCTTCAACAGAAGTAAGCCCAAATATTAGAGCTGCAGTGTTATCAAATGATTCCAATAGAACTGATTCCATGAAGGATGAGAGGTTTAGGCCATCACAAGACAATGTCAATATACTAGGAAGGAATTCTTCTATTAAAACAGTACCTAAGGAGAATAAAGATTCGGATATACCAGTTCCAGAAGTAATTTCAATCTCTGAAATGAACAAGTTATTGCTTCAAAACCATGCTTCATATCATTCTATGAGGCCAAGGTGGTCTTCGGCTGTTGATAAAGACCTACTGCATATCAGATCAGAGATTGAAAATGCACCAATTGTAGAGAATGTTGAAAATCTCTATGCTCCCCTTTATCGAAATGTTTCCATGTTCAAGAGGAGCTATGAGTTAATGGAACAGACTCTCAAAGTGTATGTATATAGAGAAGGATCTAAGCCTATAATGCATTCACCATATCTTTTGGGAATTTATGCTTCAGAGGGATGGTTCATGAGGCTGATGGAAGCTAATAAAAGATTTGTTACTAGAGACCCAAAGAAAGCCCATCTGTTTTACTTACCGTTCAGTTCTCGAATACTAGAGGAAACTTTGTATGTACAGAATTCACATAGTCATCGGAATCTGATTCAGTATCTGCATAATTATGTAGACACAATCTCGGGCAAATATCCTTTCTGGAACAGAACAGGAGGAGCTGATCATTTTCTTGTTGCCTGCCATGATTGGGCCCCTTCAGAAACAAAGTATCACTTGGCTAAGTGCATAAGAGCCCTATGCAATGCCGATGTCAAAGAAGGTTTCGTCATAGGGAAGGACATATCTCTTCCCGAAACTTATGTCCGCAATTCTCAGAATCCGACTAGAAACCTCGGAGGAAAACCGGCTTCAAAGAGGAAAACCCTCGCATTTTTCGCAGGTGGCATGCATGGTTATGTTAGGCCAATTTTGTTGCAGCATTGGGAAAATAAAGACCCGGACATGAAAATCTTCGGGACAATGCCCAAGTCTAAGGGAAACAGAAACTACATTGAGTACATGAAGAGTAGCAAGTACTGTATTTGTGCAAAGGGCTATGAAGTGAATAGTCCAAGAGTTGTGGAGGCCATTTTTTATGAATGTGTTCCAGTTATTATATCAGATAATTTTGTGCCTCCATTTTTTGAGGTTTTGAATTGGGAATCATTTGCTGTTATTATTTCAGAGAATGATATTATAAATTTGAAGAGTATACTTCTTTCAATCCCACAAAGGAGGTATCTTCAAATGCAAATGAGGGTCAAAAAGGTGCAACAACATTTCCTTTGGCACAAGAACCCTATCAAGTATGATATATTTCACATGATACTTCATTCTATTTGGTACAATAGAGTCTTCATACAAGAAAATTGTAACATGGATCGGGCATTTAGATTTCTGTGTCAAGCAGAAACTAAGAGATTAGTTTCATTCTTAGGAATAACATTAGCTATAGTTTTAGTAGTTCAGTATTCTGAACTTCCTTATACTCAATTGTTATCTTCTCTTACTACCAAGATCACTAGCTTCTCAATGGATCCATCTTTGGTTAATTCTGAAGTTGAAGGTAACAATATTACACATCCAAATGCATTTGAACAAATACCAATTAGTCCTCAAGCATCTCATTTAGATCAAGGTAGAAAAGCTAAAGGATTTGATGATGTTGTTGTGTTTAACAATTTTACAACTATAGATGTTGCTTCACCAATGGGCAGTGTTCAGGGAAAAGGTGTGAATTTGACTGCACTTTCCTCACTTGCACCTCAGTCTATGGTGCAAGTATTCAATAGAACATCCTTAGATTCGGAAACAGATTGGATAAGTCCCGCGATATCTGTTACTTCCAATGCAACTTTAGTGAAAGCAGATACAACTGATCCAGTTGATAAGGATGAAAAGTCAGGTTCTTTGCAGGGTAATGGTAAATACAAGACTACAAAGAATTCCAGAAAGCGGCCATCTAAAGTTGTTTCAATATCCGAGATGAACTTAATCTTGCAGCGCAGTCATGCTTCTTCTCGGTTACTGAAATCAAAATGGTCTTCAGCTATTGATCTGGAAATATTGTATGCTAAATCAGAGATCGAAAATGCCCCCGTCATTGTGGATGATTCAAGACTCTACTCACCTTTATACAGGAATGTCTCCATGTTTAAGAGGAGTTATGAACTAATGGAAAAGATGCTCAAAGTTTATGTCTACCAGGACGGAAACAAACCAATCTTTCACGAACCCTTATTGGATGGAATATATGCATCGGAAGGATGGTTTTTGAAATTAATGGAGGCGAACAAACAGTTTGTCTCCGGAGATCCTGGGAAGGCTCACTTGTTTTACATACCTTTCAGTTCAAGATTGTTGCAGTTAACTCTCTATGTACGTAATTCACACAAACGATCAAACTTAATCGAGTACATGAAAAATCATGTGGACATGATTGCTGGAAAGTATCCTTTCTGGAACAGAACCAACGGAACAGATCACTTTGTCGTTGCTTGCCATGATTGGGCTCCTGCAGAAACAAGAGGGCGCATGCTTAGTTGCATAAGAGCCCTCTGCAACGCTGACATTGAAGTAGGATTCAAGATAGGCAAGGATGTTTCTCTTCCAGAAACTTATATAAGGTCAGTCGAGAATCCTGTCAAAAACATCGGGGGCAACCCCCCTTCTGAGAGGCCTATCCTGGCTTTTTTCGCTGGCGGTTTACACGGCTATGTTCGGCCAGTTCTGTTGAAGCATTGGGAAAACAAAGAACCCGACATGAAAATAACGGGTCCATTACCACATGTCAGAGGTAATGCAAACTACCTCAACCTCATGAAGAGCAGTAAGTACTGCATCTGCGCAAGAGGTCATGAAGTTAATAGCCCGCGTGTGGTCGAAGCTATATTCCATGAGTGCATTCCGGTTATCATATCCGACAATTTCATACCTCCTTTGTTTGAGGTTTTGAACTGGGAATCTTTTGCCGTGTTTGTCATGGAGAAAGATATCCCGAACTTGAGGAACATACTGCTCTCGATCTCGGATGAAAGATACATAGAGATGCATAAGAGGGTGAAAAAGGATATAGCAGATTTTGGAAAAAAAAGCGATTTTTTTATGGCTACAGAGACCAAAAGCACTACGGTGAAGCTTAAGTCAAGTGCCCAAGATGGTTCTTCAAAGTCAAAGTTTGATTCTTTAGCTCTTAAGAAGAAAGTGGATACCTCCAACAAATACCCAATTGATAATTCTAAGATCAAATCTATCACCACCACTGTCACCAAATCTGAGGCTAAATCGAAACCATCGTCATCGGCAGCATCGAAAACAGTAACAAAGACAACTACAACCAAAGTGAGAGAGAGAAAAGTCTACAGTTTGCCTGGTCAGAAACATGATCCTCCGGAACAGAAAGAACCCCTGAGGATTTTCTACGAGTCGTTGTCAAAACAGATACCAACAAGCGAAATGGCCGAATTTTGGTTAATGGAACATGGGTTGCTATCTGCTGAAAAAGCTAAGAAAGCATTTGAGAAGAAGCAGAGGAAGCAAAAGCAGATTCGAACAGGAACTCCGGCGAAGCCAAAGCCAATAACTAAAACTGAAACTAGTTCACAGAAGCAACAACAACAGGCATCAAAGAATGGTGATATAAAAGCCAAGAAAAGAATTGTCAATGAGAGTGATGACGATGACGATGACGATTTCGTATTAAGTCATAAGAGAAGAAAATGGTAA 4305 0.393 MGQEFESLFRLKTKRLLWLIGIAVAAIVVYHYFEFPYGNNTIPYGFYVDKIPKSGSSRFQAADPPSDSEIFSNVIDSNQTNYTGEEHGLETVNKTRTSEEKDTISTPDFVSEPAIVSNISSRFDESDERSLVGSFRISNNESAAEQARNLEPSSYNNSMGMSYIRDAAIPSASEHKLAEPTNFAPSISPSTEVSPNIRAAVLSNDSNRTDSMKDERFRPSQDNVNILGRNSSIKTVPKENKDSDIPVPEVISISEMNKLLLQNHASYHSMRPRWSSAVDKDLLHIRSEIENAPIVENVENLYAPLYRNVSMFKRSYELMEQTLKVYVYREGSKPIMHSPYLLGIYASEGWFMRLMEANKRFVTRDPKKAHLFYLPFSSRILEETLYVQNSHSHRNLIQYLHNYVDTISGKYPFWNRTGGADHFLVACHDWAPSETKYHLAKCIRALCNADVKEGFVIGKDISLPETYVRNSQNPTRNLGGKPASKRKTLAFFAGGMHGYVRPILLQHWENKDPDMKIFGTMPKSKGNRNYIEYMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLNWESFAVIISENDIINLKSILLSIPQRRYLQMQMRVKKVQQHFLWHKNPIKYDIFHMILHSIWYNRVFIQENCNMDRAFRFLCQAETKRLVSFLGITLAIVLVVQYSELPYTQLLSSLTTKITSFSMDPSLVNSEVEGNNITHPNAFEQIPISPQASHLDQGRKAKGFDDVVVFNNFTTIDVASPMGSVQGKGVNLTALSSLAPQSMVQVFNRTSLDSETDWISPAISVTSNATLVKADTTDPVDKDEKSGSLQGNGKYKTTKNSRKRPSKVVSISEMNLILQRSHASSRLLKSKWSSAIDLEILYAKSEIENAPVIVDDSRLYSPLYRNVSMFKRSYELMEKMLKVYVYQDGNKPIFHEPLLDGIYASEGWFLKLMEANKQFVSGDPGKAHLFYIPFSSRLLQLTLYVRNSHKRSNLIEYMKNHVDMIAGKYPFWNRTNGTDHFVVACHDWAPAETRGRMLSCIRALCNADIEVGFKIGKDVSLPETYIRSVENPVKNIGGNPPSERPILAFFAGGLHGYVRPVLLKHWENKEPDMKITGPLPHVRGNANYLNLMKSSKYCICARGHEVNSPRVVEAIFHECIPVIISDNFIPPLFEVLNWESFAVFVMEKDIPNLRNILLSISDERYIEMHKRVKKDIADFGKKSDFFMATETKSTTVKLKSSAQDGSSKSKFDSLALKKKVDTSNKYPIDNSKIKSITTTVTKSEAKSKPSSSAASKTVTKTTTTKVRERKVYSLPGQKHDPPEQKEPLRIFYESLSKQIPTSEMAEFWLMEHGLLSAEKAKKAFEKKQRKQKQIRTGTPAKPKPITKTETSSQKQQQQASKNGDIKAKKRIVNESDDDDDDDFVLSHKRRKW 1434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0412 1434 MobiDBLite consensus disorder prediction 1304 1328 - -
Lal21g0412 1434 Pfam Exostosin family 321 600 IPR040911 -
Lal21g0412 1434 Pfam Exostosin family 920 1200 IPR040911 -
Lal21g0412 1434 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 806 1219 IPR004263 GO:0006486|GO:0016757
Lal21g0412 1434 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 204 646 IPR004263 GO:0006486|GO:0016757
Lal21g0412 1434 MobiDBLite consensus disorder prediction 1385 1404 - -
Lal21g0412 1434 PANTHER GLYCOSYLTRANSFERASE PLANT-LIKE PROTEIN 806 1219 - -
Lal21g0412 1434 PANTHER GLYCOSYLTRANSFERASE PLANT-LIKE PROTEIN 204 646 - -
Lal21g0412 1434 MobiDBLite consensus disorder prediction 818 847 - -
Lal21g0412 1434 MobiDBLite consensus disorder prediction 1281 1303 - -
Lal21g0412 1434 MobiDBLite consensus disorder prediction 1364 1434 - -
Lal21g0412 1434 MobiDBLite consensus disorder prediction 1281 1328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0412 Lal-Chr21 2857080 2868243 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0412 - - gmx:100818271 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0412 21 2857080 2868243 Lal21g0412 21 2857080 2868243 ECH
Lal21g0412 21 2857080 2868243 Lal4g0283 4 1829420 1832752 LSH