Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0400 ATGTTGAAGCTATGGAAATGGTACAAAAAATGTTTAAATTTTCATCCAGTTAAGACACAAGTGATTAGTTCTGGTGTTATATGGGGTGTTGGTGATGTTGCTGCTCAGGTTGTAACTCATTCTATACCCAACAAAACCATTTCTCATTTTAAGGATGGCAATGAAGATTTCAAGATCAACTGGAAACGGGTGGCTACGACCAGCTTGTTTGGGTTTGGGTTTGTTGGTCCAGTTGGACATTACTGGTTTGAATACTTGGACCGATATATAAGATTGAAACTTCTGCTTAAGCCAAATTCCTTCCGCTTTGTTGCTTCCAAAGTTGCCATTGATGGATTTATCTTTGGGCCATTTGATTTACTCATGTTTTTTACTTACATGGGATTTTGCACCGGAAAGAGTGTTACACAAATAAAAGAAGACGTGAAGAGAGATTTTCTCCCAGCATTTGTTTTGGAAGGGAGCATATGGCCGATTGTGCAAGTCGGAAATTTTCGATTTGTACCTGTAAGGTATCAGCTTCTCTATGTCAACTTCTTCTGCCTGTTGGATAGCTGTTTCTTGTCTTGGGTTGAGCAACAAGAGGATGCTCAATGGAAACAGTGGGTGAAATCTTTTCTACCTATTGAAGAACAGAAGCCCCAAGGTTGA 651 0.3963 MLKLWKWYKKCLNFHPVKTQVISSGVIWGVGDVAAQVVTHSIPNKTISHFKDGNEDFKINWKRVATTSLFGFGFVGPVGHYWFEYLDRYIRLKLLLKPNSFRFVASKVAIDGFIFGPFDLLMFFTYMGFCTGKSVTQIKEDVKRDFLPAFVLEGSIWPIVQVGNFRFVPVRYQLLYVNFFCLLDSCFLSWVEQQEDAQWKQWVKSFLPIEEQKPQG 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0400 216 Pfam Mpv17 / PMP22 family 128 189 IPR007248 GO:0016021
Lal21g0400 216 PANTHER PEROXISOMAL MEMBRANE 22 KDA (MPV17/PMP22) FAMILY PROTEIN 1 215 - -
Lal21g0400 216 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 1 215 IPR007248 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0400 Lal-Chr21 2763562 2767923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0400 7 195 Miscellaneous Gene Families AT2G14860 27.225 1.27e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0400 K13348 - gmx:100805283 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0400 21 2763562 2767923 Lal21g0400 21 2763562 2767923 ECH