Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0383 ATGGAAACTTCCACCGGCGACAACTTCGACGTCATAATAATCGGAGCCGGCGTGATGGGCAGCTCCACCGCCTACCAAGCCTCCAAAACCGGTCTCAAAACCCTCTTACTCGAGCAGTTCGATTTCCTCCACCACCGTGGCTCCTCCCACGGCGAGTCCCGCACCATAAGAGCAACCTATCCACAGCATCACTACTACCCACTCGTCATGGAATCCTACAACCTCTGGCAAGAAGCCCAAGCCCAAGCGGGCTACGACGTCTACTTCAAGGCCCATCACTTCGACATGGGCCCACAAAATGACCCCGCACTTCTCGCACTCATCGACAACTGCCGCAAACACAACATCCAACACCACCTCCTCCGCCATGACGAAGTGGCCAACAAATTCTCCGGCAGGTTCAACATACCGGAGAACTGGATCGGAGTCTACAACAACCTCGGCGGTGTCATAAAACCGTCGAAAGCAGTGGCCATGTTCCAAACACTGGCGATAAAAAACGGCGCCGTTTTGAAAGACAACGTTGAGGTTATAGATATCAAGAGAGAGAAAGAGAATGGTATCGTGGTTTTCACCGCGAGTGGTGAAAAGTTCCGCTGCAAAAAATGCGTGGTAACTGTAGGCGCGTGGGTTAGGAAGTTAGTTAAAACGGTTAGCGGTGTTGATATTCCTGTGCAGCCGTTGGAGACTAATGTTATGTATTGGAGGGTGAAGGAAGGGCATGAAGGTAAATTCAACATCGGTGATGGTTTTCCAACTTTTGCAAGCTACGGAGATTTGTGTGTGTACGGAACACCCGTTTTGGAGTACCCGGATTTGGTGAAGGTGGCGTTTCATGGTGGTGACACGTGTGATCCAGATAAGAGGAAGTGGGGCCCAGGGGTGAAGGTGGATAAGTTGAAGGAATGGGTGGAAGAGAGGTTGGGTGGGATGGTTGATTCGAGTGAAGCGGTGGTGAAACAAAGTTGTATGTATTCTATGACGGCGGATGAGGATTTTGTGATTGATTATTTGGGTGGTGAGTTTGGGAAAGATGTGGTGGTTGGTGGTGGGTTTTCTGGTCATGGGTTTAAGATGGCTCCTGTTATTGGAAGGATATTGACTCAGCTTGTGGTTGATGGTGAGGCAAGTGGGGTAGATTTGAAGCACTTTAGGATTGGAAGGTTCAACACAACAACCTCTAATTAA 1188 0.4966 METSTGDNFDVIIIGAGVMGSSTAYQASKTGLKTLLLEQFDFLHHRGSSHGESRTIRATYPQHHYYPLVMESYNLWQEAQAQAGYDVYFKAHHFDMGPQNDPALLALIDNCRKHNIQHHLLRHDEVANKFSGRFNIPENWIGVYNNLGGVIKPSKAVAMFQTLAIKNGAVLKDNVEVIDIKREKENGIVVFTASGEKFRCKKCVVTVGAWVRKLVKTVSGVDIPVQPLETNVMYWRVKEGHEGKFNIGDGFPTFASYGDLCVYGTPVLEYPDLVKVAFHGGDTCDPDKRKWGPGVKVDKLKEWVEERLGGMVDSSEAVVKQSCMYSMTADEDFVIDYLGGEFGKDVVVGGGFSGHGFKMAPVIGRILTQLVVDGEASGVDLKHFRIGRFNTTTSN 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0383 395 Pfam FAD dependent oxidoreductase 10 370 IPR006076 GO:0016491
Lal21g0383 395 SUPERFAMILY FAD/NAD(P)-binding domain 8 389 IPR036188 -
Lal21g0383 395 PANTHER PEROXISOMAL SARCOSINE OXIDASE 7 392 - -
Lal21g0383 395 SUPERFAMILY FAD-linked reductases, C-terminal domain 227 328 - -
Lal21g0383 395 Gene3D - 9 375 IPR036188 -
Lal21g0383 395 Gene3D - 92 327 - -
Lal21g0383 395 PANTHER PEROXISOMAL SARCOSINE OXIDASE 7 392 IPR045170 GO:0016491|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0383 Lal-Chr21 2604487 2605674 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0383 K00306 - gmx:100789864 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0383 21 2604487 2605674 Lal4g0259 4 1676186 1677280 LSH