Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0380 ATGAATGATGATAGTAATACTGAGAGGGAACCATTGATTCCAGGGTTACCTGATGAAGTAGCTGAGCTATGTCTTCTTCATCTTCCATACCCATACCACTTTCTTCTTCGCTCTGTTTCATTCTCATGGAACATTGCTACATCAAATCCTTCATTCCTTCACACAAAGCATTCCCTCTCGCTCTCACAACCTTACCTCTTCGTCCTTTCCTTTCATAAACCAACCTCTACTGTCCGGTGCCAAGCCCTCCACCCTTCCACCGCCACCTGGTTCTTCCTTCCACCTGCCCCCTTCCCCGCCACCGTATCATTCCCGGAGTTTGCCTGCGCTGCACTTCCGCGCCAGGGGAAGCTCTTCGTCATGTGCGGAACGGGTTGCAGCAGCAGCAACAGCAACCTTGTTTACAGTACCGCCACAAATACATGGTCATCGGCGTCACCAATGCCGACCGCGAAGTCGTTATTCGCGGCGGAGACTGTGAGCGGCAAAATCGTAACCGTCGGTGGGAGTGGAACTGAAATCTACGACACAGAGAGTGACACGTGGAGGTTAGGTAAGGGGTTGGGTGATGACCTGTCAAGTTACGAAATGGTGGCGGTTAACGGAAAAGTCTTTGTGGTAACGGAATACGGGGAGTGTCAGGTGAAGGTGTATGATGAGGAGAGTGACACGTGGCAATATGTGGGAGGTGATAGGTTTCCAAGTGATGTAATGAGAAGACCCTTTGCAGTGAGAGGGTTTGAAGAGAAAATATATGTGGTGTCTGGTGGGTTGAACGTAGCAATTGGAAGTGTTGTTATTTGTGAAGAAGATGATGATAATAATGGAGTGAGAATGAGGTGGGAGGTGGTGGAAGCACCAAAGAGTTTAGGTGAATTGTCACCATGGAAATGTCAGGTGCTGTATGCATGA 912 0.4901 MNDDSNTEREPLIPGLPDEVAELCLLHLPYPYHFLLRSVSFSWNIATSNPSFLHTKHSLSLSQPYLFVLSFHKPTSTVRCQALHPSTATWFFLPPAPFPATVSFPEFACAALPRQGKLFVMCGTGCSSSNSNLVYSTATNTWSSASPMPTAKSLFAAETVSGKIVTVGGSGTEIYDTESDTWRLGKGLGDDLSSYEMVAVNGKVFVVTEYGECQVKVYDEESDTWQYVGGDRFPSDVMRRPFAVRGFEEKIYVVSGGLNVAIGSVVICEEDDDNNGVRMRWEVVEAPKSLGELSPWKCQVLYA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0380 303 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 198 303 - -
Lal21g0380 303 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 4 198 - -
Lal21g0380 303 Gene3D - 34 275 IPR015915 GO:0005515
Lal21g0380 303 SMART kelc_smart 163 202 IPR006652 GO:0005515
Lal21g0380 303 SMART kelc_smart 117 162 IPR006652 GO:0005515
Lal21g0380 303 SUPERFAMILY Kelch motif 64 260 IPR015915 GO:0005515
Lal21g0380 303 SUPERFAMILY F-box domain 9 72 IPR036047 GO:0005515
Lal21g0380 303 Pfam F-box domain 15 53 IPR001810 GO:0005515
Lal21g0380 303 PANTHER F-BOX PROTEIN AFR 4 198 - -
Lal21g0380 303 PANTHER F-BOX PROTEIN AFR 198 303 - -
Lal21g0380 303 SMART fbox_2 16 56 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0380 Lal-Chr21 2575721 2577902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0380 16 184 Miscellaneous Gene Families AT4G33900 24.390 4.46e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0380 - - gmx:100802282 270.781