Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0339 ATGGACTTGAAACAAAGTGAAAAAGATCCTGTGATTACTCAAATTAGCATTGGTGGATTTGGCAGCGAGAGCAAAGCAAAGGATCTTGTAACATACTTGGAAGATAAAATTGGACTTGTATACAGGTGTCGGTTGAAAACTTCTTGGACACCTCCCGAGTCTTATCCAGAATTTAATATCAGTAATGCTGCACATATTACAATAACAGATGACTATCAGAAGGTGGAGCCCCATGCCTTTGTGCATTTTGTATTGCCGGGATCTGCAAAGGCAGCCTATGATGCTGCAGGTCAATGTGATCTATCTTGGAAGAATCAACAATTAATGGTCAGCTGTGGCCCTGAAAATCCATACTTCTTGAGCCAAAGGAGGAGTACTACAACTCCTTTTAAGCTTTCTGATGTAATTGTTGAAATTGGGACCTTAATAAGCCCAGAGGAATATGTTGTTGCTTGGAGAGGAACCGATAGAGGGGTCAACTTTCTAGTGGATCCTTTTGATGACATGTGCAGACTTTGTTTCAACAGAGATACTGCATTCTCATTCAAAGGAGATGTGAGAAACGCAGTGATAAAGTGTGATTTTCAGGTGGGATTCTTAATTAGAGACATAAATGAGATCAGGCGATATAAGGATACATCTCATCATGTTGTTATATTACAACTGGCTTCACCACCTATGGTTTGGTACCGGACCGCTGATGATGATATAATAGATTCAGTTCCATTTGATTTGCTGGATGACGATGATCCTTGGATTAGGACTACTGATTTTACACCTAGTGGGGCCATTGGACGGTGCAATTTTTATAAAATTTCAATCCCACCTCGCCATGGTGCAAAACTGGAGAAGGCCATGAAATACCTGACAGGTCGAAGAGTGCAACAGATTCAACTTAGAAGGCCACTTAGGTTACGGAACGAACCTGGTTTTGGGGTGCTTATGTCAGATCCCTTCTTCTGTATTCACTTTCAGGAGGGCATTACTTTTGACATAATGTTCTTGGTCAATGCAGTCATACACAAAGGTATATTCAACCAGCACAGGTTATCAGATAGTTTTTTTGAATTACTGAGAAATCAACCTAAGGATGTCAATGTGGCTGCTCTGAAGCACTTATGGTCTTACAAGCGCCCAGTGTTTGATGCAGTTAAGAGGCTGAAAGCAGTCCAAGAATGGCTGCTTAGAAATCCGAAACTTTATCAGAGCTCTAACCTGTTAGATCATATTGTTGAGGTTAGAAGACTGGTAATTACTCCAACAAAAGGCTATTGTTTACCACCAGATGTTGAAGTGTCCAACAGGGTTCTCAGAAAATTCAAGGAAGTTTCAGATCGTTTCTTGAGAGTCACCTTTATGGATGAAGGTATGCAAACAATGAATGTGAATGCTCTTAACTACTATGTTGCTCCTATAGTAAAGCAAATCACATCCAACTCCTTTCCACAGAAAACTAAGATATATAAAAGGGTGAAAACCATCTTGGAGGACGGATTTTACTTGTGCAGCCGAAAATATTCATTTTTGGCCTTTTCATCCAATCAGCTGAGGGATCGTTCTGCTTGGTTTTTTGCTGAAGACAACAACCTATCTTGTGATAATATTAGAAGTTGGATGGGTAGGTTTAATCAAACGAATGTAGCTAAGTGTGCTGCTAGGATGGGACAATGCTTCTCGTCTACATATGCAACAGTAGAAGTTGTAGCAAATGAAGTCAATTCCATGTTGCCTGATATTAAGAGGAATACTTATGTTTTCTCTGATGGTATTGGCATTATCTCTCCTGATCTTGCAAGTGAAGTTGCAGAAAAATTGAAATTGGATAACATACCCTCTGCTTATCAGATCAGATATGCTGGTTTTAAAGGGGTTGTAGCTTCTTGGCCTATCAAAGGGGAAAAGTTCCGACTTGCTTTAAGGCCTAGTATGGACAAATTTATATCTAATCATACTAACTTAGAGATTTGTGCTTGGACCAGATTTCAGCCTGGTTTTCTCAACAGGCAGATTATAACATTGCTATCAGCATTGGATGTTTCTGATGACATATTTTGGAATATGCAGGAGGCAATGATTTCAAGATTAAATCAAATGCTTGTGAATGCAGATGCCGCGTTTGATGTTCTGACTAAATCTTGTGCTGAGCATGGAAACGCTGCAGCAATAATGTTAAGTTGTGGCTTCAGTCCTCAGACAGAACCTCATCTTAGAGGCATGTTAACTTCTGTACGTGCTGCACAACTCTGGGGCCTTAGAGAAAAGTCAAGGATTTTTGTACTATCTGGGCGATGGTTAATGGGTGTCTTAGATGAGTCAGGTGTACTTGAACAGGGGCAGTGCTTTATTCAAGTATCTACTCCTTCAATTGAAAATTGTTTCTCAAAGCATGGTTCAAGATTTTCAGAGACTAAGAACATGGAAGTTGTTGAAGGTCTTGTGGTTATAGCTAAGAACCCTTGTCTTCACCCGGGAGATGTAAGAGTTTTGGAGGCAGTTGATGCTCCTGGTTTACATCACTTATATGATTGTCTTGTCTTCCCTCAAAAGGGTGATAGACCCCATACAAATGAAGCTTCTGGAAGTGACCTTGATGGAGATCTATATTTTGTTACATGGGATGGAAATCTTATTCCACCCAGTAAGAGGAGCTGGATACCCATGGATTATACTCCACTAGAAAGCAGTATTAAGACACGGAAAGTCATGATTCGGGACATCACAGAGTTTTTTGCTAAAAACATGGTAAATGAGCATTTAGGTGCAATATGCAATGCACATGTGGTACATGCTGATTGCAGTGACTATGGAGCCTTGGATGAGAATTGCCTAACCCTGGCTAAGTTAGCAGCCACTGCTGTTGATTTTCCAAAGACAGGGAAGCTTGTCGCTATGCCTTCTAACCTGAAACCAAAACTATACCCTGATTTCATGGGGAAAGAGCCACACCGGTCTTACAAGTCCAAGAAAATCCTGGGTAGACTTTACCGGCGTATCAAAGATGCTTATGATGAAGACATTGATGCTGCGGATTCGAACTATGGGACAGGTGATATACCCTATGATATGGATCTGGAGGTTCCCGGATCTGATGATTTTATTGCCGATGCATGGGAACAAAAGTGCACTTATGATGGCCAGTTGAGTGGACTGCTAGGTCAATACAAAGTGAAAAGAGAAGAAGAAGTTGTCACTGGACAGATTTGGTCTATGCCCAAATACAATAGTAGGAAGCAAGGGGAACTTAAGGAGAGGCTCAAGCGCTCATATAGTGCCCTGAAAAAAGAATTTAGGCAAATTTTTGAGAAATTGAACACAGATGTAGAGTTAAACGATGAAGAAAGAAATTTGTTGTATGAGAAGAAAGCTTCGGCTTGGTATCAGGTGACATATCATCCTAAATGGGTTAAAAAGTCCCTTGATCTGCTATTTAAATCCTCAGAGGATGATCTAGAGCCAGATAGTCTCGGAAATACAGTGATGCTGAGTTTTCCTTGGATCGCAGTTGATTACCTTGCTCGAACAAAGATAAGGCATCAGGGACCTGGAAAGTTTGATTCAACTAAGCAAGTTGGTTCTTTGGCGAAATACCTATCTGAAAGGTTATAA 3606 0.4054 MDLKQSEKDPVITQISIGGFGSESKAKDLVTYLEDKIGLVYRCRLKTSWTPPESYPEFNISNAAHITITDDYQKVEPHAFVHFVLPGSAKAAYDAAGQCDLSWKNQQLMVSCGPENPYFLSQRRSTTTPFKLSDVIVEIGTLISPEEYVVAWRGTDRGVNFLVDPFDDMCRLCFNRDTAFSFKGDVRNAVIKCDFQVGFLIRDINEIRRYKDTSHHVVILQLASPPMVWYRTADDDIIDSVPFDLLDDDDPWIRTTDFTPSGAIGRCNFYKISIPPRHGAKLEKAMKYLTGRRVQQIQLRRPLRLRNEPGFGVLMSDPFFCIHFQEGITFDIMFLVNAVIHKGIFNQHRLSDSFFELLRNQPKDVNVAALKHLWSYKRPVFDAVKRLKAVQEWLLRNPKLYQSSNLLDHIVEVRRLVITPTKGYCLPPDVEVSNRVLRKFKEVSDRFLRVTFMDEGMQTMNVNALNYYVAPIVKQITSNSFPQKTKIYKRVKTILEDGFYLCSRKYSFLAFSSNQLRDRSAWFFAEDNNLSCDNIRSWMGRFNQTNVAKCAARMGQCFSSTYATVEVVANEVNSMLPDIKRNTYVFSDGIGIISPDLASEVAEKLKLDNIPSAYQIRYAGFKGVVASWPIKGEKFRLALRPSMDKFISNHTNLEICAWTRFQPGFLNRQIITLLSALDVSDDIFWNMQEAMISRLNQMLVNADAAFDVLTKSCAEHGNAAAIMLSCGFSPQTEPHLRGMLTSVRAAQLWGLREKSRIFVLSGRWLMGVLDESGVLEQGQCFIQVSTPSIENCFSKHGSRFSETKNMEVVEGLVVIAKNPCLHPGDVRVLEAVDAPGLHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDGNLIPPSKRSWIPMDYTPLESSIKTRKVMIRDITEFFAKNMVNEHLGAICNAHVVHADCSDYGALDENCLTLAKLAATAVDFPKTGKLVAMPSNLKPKLYPDFMGKEPHRSYKSKKILGRLYRRIKDAYDEDIDAADSNYGTGDIPYDMDLEVPGSDDFIADAWEQKCTYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKRSYSALKKEFRQIFEKLNTDVELNDEERNLLYEKKASAWYQVTYHPKWVKKSLDLLFKSSEDDLEPDSLGNTVMLSFPWIAVDYLARTKIRHQGPGKFDSTKQVGSLAKYLSERL 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0339 1201 Pfam RNA dependent RNA polymerase 418 998 IPR007855 GO:0003968
Lal21g0339 1201 Coils Coil 1082 1102 - -
Lal21g0339 1201 PANTHER RNA-DEPENDENT RNA POLYMERASE 6 7 1200 - -
Lal21g0339 1201 PANTHER RNA-DEPENDENT RNA POLYMERASE 7 1200 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0339 Lal-Chr21 2265760 2273223 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0339 K11699 - gmx:100795178 1996.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0339 21 2265760 2273223 Lal21g0339 21 2265760 2273223 ECH