Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0327 ATGGGTTGGAGATACAAAGCTGGTTTATTCCTTATGGCCACTGTTGTTATTATTTGGGTAACCTCTGCCGAAGTTACCCAGGACATTTTTACAGACTATAAGCAGCCATTTGCGGTGACATATCTTGGAGCTTCTCTTATGGTAGTTTACCTCCCAATAGCATTCATTAAAGATTGGTTTCGTAACTTTCTTAAACGCCGGTCTTCTAAAGGTGGCAAAACTGCAGTAAGCATGGATGAGTTTTCTATCAGTATTAGTTCTCCTCTCAGCGGTAATGGAGTGCAGAAAAATCTTGAACAGGAAATGGGAAGTGTGATTCGAAAAGATAGTGATTTAGACCTTTCAGCTCTTGCAGAGTTAAAGCCATTGGTTGCTAAATATACTGACAATAGTAATGTGCTAAAGGCAGAGAGACAACTTACTGGCCGGGAAATTGCCACTTATGGATTTTACATTGCACCTATCTGGTTTGTAACAGAGTATCTATCAAATGCTGCCCTTGCACGAACAAGTGTTGCAAGTACAACAGTATTGTCATCTACTTCAGGACTTTTCACTCTTTTCATTGGCGCATTTCTTGGTCAAGACACTTTAAATGTACCAAAAGTAGCTGCCGTCTTTGTCAGCATAACCGGGGTTGCCATGACAACTCTGGGGAAAACTTGGGCTTCGGATGAGTCAGAATTAAGTACTGTCAATGGAAATCACTCTCTCGTTGGAGATCTTTTTGGCATTCTCTCGGCTATGTCATATGGTCTATTTACAGTTCTTCTCAAAAAGTTTTCTGGTAACGAAGGAGAAAAGGCTGATGTACAAAAGCTGTTTGGGTATGTTGGATTGTTCACACTAGTAGCACTCTGGTGGCTTGTCTGGCCATTGATGGCCTTGGGAATTGAGCCCAAGTTTACGATACCCCACTCTGCTAAAATGGACGAAGTGGTTCTCGCCAATGGAATAGTTGGAAGCGTGGTGTCAGACTATTTCTGGGCACTTTGTGTTGTATGGACAACTCCCCTTGTGGCCACTTTGGGTTTGTCACTCACCATTCCCCTTGCTATGGTGGCTGACATGGTGATCCATGGGCGACATTATTCGGCAATGTACATACTTGGCTCAGTTCAGGTACGAGTTGATGTTAGTGCCAGAAACCCTGGCAAAATTCAAGCAGCACTTACAGAAACTAGGAGGGGGCTCAGTGAGTTTGTTTTAGAGCCACTGAAGGGTGAACAGTATTACGAGATTAGGGAACCATTCTCTATTATGTCCATTGTGAAAAGTCCAATGGGTCTGATGATGGGATTCATGCTGATTGTTGTCTTCCTCATGCCCAAGTTAATGGAGAACATGGATCCAGAAGAAATGAAACGTGCACAAGAAGAAATGAGAAATCAAGGGGTTCCATCTTTGGCAAGCCTGTTACCTGGTGCTGCAAGAAGCAACTAG 1443 0.431 MGWRYKAGLFLMATVVIIWVTSAEVTQDIFTDYKQPFAVTYLGASLMVVYLPIAFIKDWFRNFLKRRSSKGGKTAVSMDEFSISISSPLSGNGVQKNLEQEMGSVIRKDSDLDLSALAELKPLVAKYTDNSNVLKAERQLTGREIATYGFYIAPIWFVTEYLSNAALARTSVASTTVLSSTSGLFTLFIGAFLGQDTLNVPKVAAVFVSITGVAMTTLGKTWASDESELSTVNGNHSLVGDLFGILSAMSYGLFTVLLKKFSGNEGEKADVQKLFGYVGLFTLVALWWLVWPLMALGIEPKFTIPHSAKMDEVVLANGIVGSVVSDYFWALCVVWTTPLVATLGLSLTIPLAMVADMVIHGRHYSAMYILGSVQVRVDVSARNPGKIQAALTETRRGLSEFVLEPLKGEQYYEIREPFSIMSIVKSPMGLMMGFMLIVVFLMPKLMENMDPEEMKRAQEEMRNQGVPSLASLLPGAARSN 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0327 480 PANTHER OSJNBA0070O11.5 PROTEIN 1 376 - -
Lal21g0327 480 Pfam EamA-like transporter family 138 217 IPR000620 GO:0016020|GO:0016021
Lal21g0327 480 SUPERFAMILY Multidrug resistance efflux transporter EmrE 138 220 - -
Lal21g0327 480 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 1 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0327 Lal-Chr21 2170453 2179277 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0327 K15289 - gmx:100792013 624.394