Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0326 ATGGGTTCTCTCTCACTTCTCAAACCCTTATTCTTCTTCTCATATCGACCAATTCTCATACCCTCCCCCTTCTTCAGAAGAACCAGAACCCGTTCATTCAACATCACTTCTCTGGGCACATCCCAGCCGTTAATAACTGCACAAAACAACAATTTCAAATCCAACGGTGACACTCTTAGTGAGAGTTTCAGTTCAGGTTTGAAGAATGCTCCGTCACTTTGGTTTTACAATACCATGACTAAAAAGAAGGAATCTTTCAAACCCAAACTTGATTCCAAGGTGGGAATGTATGTTTGCGGTGTCACTGCTTATGATCTTAGTCACATTGGACACGCTCGTGTTTATGTCAATTTTGACCTTCTTTTCAGATATTTTAAGCATTTGGGATATGAAGTGTGTTATGTTCGCAATTTTACTGATGTAGACGACAAGATAATTGCTAGAGGAAAGGAGGTAGGAGAAGATCCAATCAGTTTGAGCCAACACTATTGTGAGGAGTTCTGTCAAGACATGGTTACTCTGAATTGTCTGCCTCCTTCCATGGAACCTAAAGTCTCAGACCACATGCCTCAGATTATTGATATGATTGACAAGATTCTTAGTAATGGATATGCCTACGTTGTTGATGGGGATGTATACTTTAATGTAGAAAACTTCCCAGAATATGGGAAATTATCTGGTCGTGATCTAGAGGATAATCGAGCTGGTGAGAGGGTCGCTGTTGATTCAAGGAAAAAACATCCTGCTGATTTTGCTCTTTGGAAGTCTGCAAAGCCAGGAGAGCCTTTTTGGGAGAGTCCGTGGGGTCCCGGAAGACCTGGGTGGCATATTGAATGCAGTGCTATGAGTGCAGCTTATCTTGGTTACTCTTTCGACATCCATGGTGGAGGGATTGATCTTGTGTTTCCTCACCATGAAAATGAAATTGCTCAGAGTTGTGCTGCATGTCAAAAAAGTGATGTAGGCCTATGGATGCACAATGGATTTGTCACTATTGACAATGAGAAGATGTCTAAATCTCTGGGAAACTTTTTTACGATACGGCAGGTTGTAGACCTTTACCACCCACTAGCTTTGAGATACTTTTTGATGGGAGCCCATTATCGATCTCCAATTAACTATTCTCACATACAGCTTGAAAGTGCTTCAGACCGTGTTTTCTATATATATGAGACATTACATGAATGTGAAAGCTTTCTTATTGAGCATGATCAGACAGTTAGGAAGGATTCCGTCCCGACAGATACACTGACCATAATTGATAACTTCCAGAATGTTTTTCTGACCTCAATGTCTGATGATCTTCACACTCCTGTTGTATTGGCTGGGCTGTCTGAACCTTTAAAATCAATTAATGATTTGCTGCATACTCGTACGGGGAAAAAACAAAAATTTCGGGTAGAATCACTTGCAGCCTTGGAGAAGAGCATCAGGAATGTCCTGACAGTTTTAGGACTTATGCCTGCAAGATATTCTGAGGTTTTGCAGGAGCTTAAGGAAAAGGCTTTAAAGCGTGCAAACTTGACAGAAGATGAAGTATTGAGGAAAATTGAAGAAAGAAGTTGTGCTAGAATAGAAAAAGAGTATGCTAAATCAGATGCAATAAGAAAGGATTTGGCTGTTGTTGGTATTACTCTTATGGACAGTCCCAATGGCACAACTTGGAGGCCTGCCATTCCTCTTCCCCTTCAAGACCACCATATTGATTCTCTTTGA 1716 0.4091 MGSLSLLKPLFFFSYRPILIPSPFFRRTRTRSFNITSLGTSQPLITAQNNNFKSNGDTLSESFSSGLKNAPSLWFYNTMTKKKESFKPKLDSKVGMYVCGVTAYDLSHIGHARVYVNFDLLFRYFKHLGYEVCYVRNFTDVDDKIIARGKEVGEDPISLSQHYCEEFCQDMVTLNCLPPSMEPKVSDHMPQIIDMIDKILSNGYAYVVDGDVYFNVENFPEYGKLSGRDLEDNRAGERVAVDSRKKHPADFALWKSAKPGEPFWESPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGIDLVFPHHENEIAQSCAACQKSDVGLWMHNGFVTIDNEKMSKSLGNFFTIRQVVDLYHPLALRYFLMGAHYRSPINYSHIQLESASDRVFYIYETLHECESFLIEHDQTVRKDSVPTDTLTIIDNFQNVFLTSMSDDLHTPVVLAGLSEPLKSINDLLHTRTGKKQKFRVESLAALEKSIRNVLTVLGLMPARYSEVLQELKEKALKRANLTEDEVLRKIEERSCARIEKEYAKSDAIRKDLAVVGITLMDSPNGTTWRPAIPLPLQDHHIDSL 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0326 571 Gene3D HUPs 58 373 IPR014729 -
Lal21g0326 571 PANTHER CYSTEINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIAL 73 563 - -
Lal21g0326 571 Gene3D - 374 557 - -
Lal21g0326 571 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 409 556 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Lal21g0326 571 Hamap Cysteine--tRNA ligase [cysS]. 73 558 IPR015803 GO:0004817|GO:0005524|GO:0006423
Lal21g0326 571 PANTHER CYSTEINYL-TRNA SYNTHETASE 73 563 IPR024909 -
Lal21g0326 571 SUPERFAMILY Nucleotidylyl transferase 75 381 - -
Lal21g0326 571 Pfam tRNA synthetases class I (C) catalytic domain 88 382 IPR032678 -
Lal21g0326 571 TIGRFAM cysS: cysteine--tRNA ligase 75 556 IPR015803 GO:0004817|GO:0005524|GO:0006423
Lal21g0326 571 CDD CysRS_core 74 375 IPR032678 -
Lal21g0326 571 PRINTS Cysteinyl-tRNA synthetase signature 96 107 IPR024909 -
Lal21g0326 571 PRINTS Cysteinyl-tRNA synthetase signature 132 141 IPR024909 -
Lal21g0326 571 PRINTS Cysteinyl-tRNA synthetase signature 261 279 IPR024909 -
Lal21g0326 571 PRINTS Cysteinyl-tRNA synthetase signature 292 313 IPR024909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0326 Lal-Chr21 2165154 2169664 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0326 K01883 - gmx:100786700 919.842