Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal21g0309 | ATGGCTATCGCTTTCTTCTCTCTCGCACTTTTCCTTTTTCTCTCCCTCGATTCTGATTTCCCTTATTCTCCTGCTTCTTCTGTATCTGCTGCTTCCTCCGAAGGCGTCGAGGTGGAGATTACTTATGGATCGGTGTTGAAGCTTATGCATGAGAAGACCAAAGTTCGGTTGCATTCTCATGAGGTGCCATATGGTTCTGGAAGTGGACAACAATCAGTTACTGGTTTTCCCAGTGTTGATGATTCCAATAGTTACTGGGTTGTTAAACCTCAGCTAGATTCTTCTGCTAAACAAGGTGACACCATTAAAAGTGGAACACTCATTAGACTGCAGCATATGAAGACAAAGAAGTGGCTGCATAGCCATTTGCATGCATCCCCAATATCAGGCAATCTTGAGGTGAGCTGCTTTGGAGGGGAAACTCAGTCTGACACTGGGGACCATTGGAAGCTTACAATAGAAGGAAGTGGGAAGACTTGGAAGCAAGATCAAAAGATTCGACTTCAACATGTGGACACTGGAGGCTATCTGCACAGTCATGATAAGAAATACACTCGAATTGCTGGGGGGCAGCAAGAGGTTTGTGGTGTTCGTGAAAAGCGTGCTGAGAATATCTGGTTGGCAGCAGAAGGCGTCTACCTTCCAGTTACTGGAAGCAAATGA | 663 | 0.454 | MAIAFFSLALFLFLSLDSDFPYSPASSVSAASSEGVEVEITYGSVLKLMHEKTKVRLHSHEVPYGSGSGQQSVTGFPSVDDSNSYWVVKPQLDSSAKQGDTIKSGTLIRLQHMKTKKWLHSHLHASPISGNLEVSCFGGETQSDTGDHWKLTIEGSGKTWKQDQKIRLQHVDTGGYLHSHDKKYTRIAGGQQEVCGVREKRAENIWLAAEGVYLPVTGSK | 220 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal21g0309 | 220 | ProSiteProfiles | MIR domain profile. | 99 | 154 | IPR016093 | - | |
| Lal21g0309 | 220 | PANTHER | BNAA09G55850D PROTEIN | 1 | 217 | - | - | |
| Lal21g0309 | 220 | SUPERFAMILY | MIR domain | 38 | 211 | IPR036300 | - | |
| Lal21g0309 | 220 | SMART | mir_2 | 99 | 154 | IPR016093 | - | |
| Lal21g0309 | 220 | SMART | mir_2 | 157 | 211 | IPR016093 | - | |
| Lal21g0309 | 220 | SMART | mir_2 | 37 | 91 | IPR016093 | - | |
| Lal21g0309 | 220 | ProSiteProfiles | MIR domain profile. | 37 | 91 | IPR016093 | - | |
| Lal21g0309 | 220 | ProSiteProfiles | MIR domain profile. | 157 | 211 | IPR016093 | - | |
| Lal21g0309 | 220 | Pfam | MIR domain | 57 | 203 | IPR016093 | - | |
| Lal21g0309 | 220 | Gene3D | - | 24 | 219 | - | - | |
| Lal21g0309 | 220 | PANTHER | STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN | 1 | 217 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal21g0309 | Lal-Chr21 | 2048602 | 2051414 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal21g0309 | - | - | gsj:114414928 | 365.925 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal17g0206 | 17 | 1249769 | 1252684 | Lal21g0309 | 21 | 2048602 | 2051414 | LSH |