Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0308 ATGGAAGATATAGAGGAAGAGGTTCAGAAAACGGTGCCACCAACGGCGGTTTCGGATCCAGAGCTTGAAGAGAAGCTTCTCGAAGTTGGAGAAAAGCTCGTAGAGCCTCCTTCTTCGGTGGAGGAGCTTCTATCTCTTCTAGATCAAGTTGATAGTTTCCTATCAAGGGTTGAACAGTCACCTTCCATCTCTATGCAAAATGCGCTCTGTCCATCATTGAAAGCATTAATTGCTGATGAACTTTTAAGACATTCAGATAATGATGTCAAAGTTGCAGTTGCCTCTTGCATCAGCGAAGTAACAAGAATCACTGCGCCTGAAGCTCCTTATGATGATGACCAAATGAAGGAAGTCTTTCAATTAATCATATCTTCATTTGAAAATCTATATGATGAAACAAGTCAGTCGTATGCAAAAAGGATCTCAATTCTTGAAACTGTTGCGAAAGTCAGATCATGCGTGGTAATGTTGGACCTTGAATGCGATGCCCAAATTTCGAAGATGTTTCAGCATTTCTTGAAGGATATAAGGGAACATCACCCAGAGAATGTTTTTACATCCATGGAAATAATTATGACCCTTGTCCTGGAGGAAAGTGAAGATATATCCCTGGAACTACTCTCTCCACTCTTGGATAGTGTTAAGAAAGACAATGAGGAAGTTTTTCCAATTGCTAAAAAGTTGGGGTTGAGGGTCCTTGAAAGTTGTGCTACCAAGCTTAAACCCTACTTATTGCAAGCAGTGAAAAGCTTGGGTATTTCTTTGGATGATTATAGTACGATACTTGCCTCAATATGCCAAGGTGCATCTGATAGCCTGGAGCAAAATGACATATGTGTTACTAGAGAGCAGATGGAAGATGGGAGCAAGTTAGCAAAACAGTCATCGGAGGAGTCAAAGCAAATGGTTAAAAAGGATAAAAGGGAAGTAGTACCTTCTCATCAAGATATTGCGGTCAGAGGCATATCTCCCAAGTCAGTCATGAATAATGGCGTTGCGAAGATTGGAGAATATTTTTGTTTAGCAGATTCAAAGTCCCTTAAGAGGCAAGAGGATACTGATTGTTCTGATAAGTCCAAAGATGTGAATGTATCTGGTTATGTGGAGCCCAATGGTTTGGACACTAAAACGGTTGACAAGAGGGAACAAAATCCAGAACATCCGACCAGGAAGCGGGGAAGGAAATCTAGCTCTTCAACCAAGTTTGCTGAACCTTTTGAGGGTCAAGTTGCTGCTAATGAGAAAGAAGCTGAGAAAATGCTTGACTCTGAAAATCACAGTGAGGAGGTTCCCAGTTCACTTCATGAGGATGCTTCTGTTGAAGCAGCAGGACCTTCAGAGACTGACAAAGAGACCGATGCTAATATTTTGTCTCCAAAAGCAGGCCATGGTGATTCTGAAGTTATTGGTTCTTCACCAGCCGAGGGCCTCCATGATAGAAATCGTTCAAAGAAAATTGGACGTGCAAAAACAAAGGATGTCCATGCAAAAGAAGTAGCTGCAGAGGACGTTTTCAAGGTGAATGATGTAACAAGTGACTCTGAAGTCAAACCTGCCAAACAGTCTGTGCAAAAGGCACTTGGTCGGAAGTCTGATGTAAAAAAAAATTCTGTGGCTGATTCAGTCAAAAAAGAAAGTTCGACCACAAGTGATACAGATGCCAAAAAGCAATCAGCTAAGACATCAGATAAAAGCAACAAGGGTGATGGTGGATCCTCCTCAAGACAGCCAGAAGAAAAGAAAAAGTCAGGACGGGGGAAAGCTAGCTTTGAAAAGGGTGTAGTGAAATCTTCTGCTAAAGATGTGGATGTGGAGTCAGATATCAAGGAATACGGTGAAAATCTTGTTGGTTTACGGATTGAAGTTTGGTGGCCAGATGATCGTGAGTTTTACAAAGGTGTTATTGATTCTTTTGATCTTGTCAACAAGAAGCACAAGGTTAATTATGATGATGGTGAAGTAGAAATATTACATCTTAGAAAGGAAAAGTGGAAGATCATCAAACCTGCTGATTCTGATTTAGATGGGGATGCAGGAAGTGATTGTGCCAGTTATGATGGTTCTTCTGATATGTATGTTCTCCATATTCTTCTTGATGTTGTTTATCAACCTCCAAGGAAGAAAGGGAAAACAAGTGCTGGTGATTCAACTAAGCAAAGAAAGATGGATGCTTCTTCCAAAAGTGCTAGAGAAAAGGTGTTCAGTAAATCGAAGGGTGCATCCACAAAGTCTAGTGGTAAGTCCAAAGATGGCCGCAAATCCAAAGATTCCCTTACTATTAGCAAATCTGACGATGAAGAACCTGACAGAAAATTTAAGAACAACACTCCTAGAAGTGTTGGCAGTAAATCTATTGCTGCTGCACAAAAAATGTCTGGTAAATCGAAAAACACTGGCGCTTCCAATAAATATGGAGAGAAAAGATTCAGAGAATGA 2436 0.4072 MEDIEEEVQKTVPPTAVSDPELEEKLLEVGEKLVEPPSSVEELLSLLDQVDSFLSRVEQSPSISMQNALCPSLKALIADELLRHSDNDVKVAVASCISEVTRITAPEAPYDDDQMKEVFQLIISSFENLYDETSQSYAKRISILETVAKVRSCVVMLDLECDAQISKMFQHFLKDIREHHPENVFTSMEIIMTLVLEESEDISLELLSPLLDSVKKDNEEVFPIAKKLGLRVLESCATKLKPYLLQAVKSLGISLDDYSTILASICQGASDSLEQNDICVTREQMEDGSKLAKQSSEESKQMVKKDKREVVPSHQDIAVRGISPKSVMNNGVAKIGEYFCLADSKSLKRQEDTDCSDKSKDVNVSGYVEPNGLDTKTVDKREQNPEHPTRKRGRKSSSSTKFAEPFEGQVAANEKEAEKMLDSENHSEEVPSSLHEDASVEAAGPSETDKETDANILSPKAGHGDSEVIGSSPAEGLHDRNRSKKIGRAKTKDVHAKEVAAEDVFKVNDVTSDSEVKPAKQSVQKALGRKSDVKKNSVADSVKKESSTTSDTDAKKQSAKTSDKSNKGDGGSSSRQPEEKKKSGRGKASFEKGVVKSSAKDVDVESDIKEYGENLVGLRIEVWWPDDREFYKGVIDSFDLVNKKHKVNYDDGEVEILHLRKEKWKIIKPADSDLDGDAGSDCASYDGSSDMYVLHILLDVVYQPPRKKGKTSAGDSTKQRKMDASSKSAREKVFSKSKGASTKSSGKSKDGRKSKDSLTISKSDDEEPDRKFKNNTPRSVGSKSIAAAQKMSGKSKNTGASNKYGEKRFRE 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0308 811 MobiDBLite consensus disorder prediction 527 563 - -
Lal21g0308 811 MobiDBLite consensus disorder prediction 411 435 - -
Lal21g0308 811 MobiDBLite consensus disorder prediction 491 510 - -
Lal21g0308 811 MobiDBLite consensus disorder prediction 711 776 - -
Lal21g0308 811 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 18 801 IPR039776 GO:0007064
Lal21g0308 811 MobiDBLite consensus disorder prediction 1 20 - -
Lal21g0308 811 SUPERFAMILY Tudor/PWWP/MBT 614 654 - -
Lal21g0308 811 MobiDBLite consensus disorder prediction 705 811 - -
Lal21g0308 811 MobiDBLite consensus disorder prediction 374 393 - -
Lal21g0308 811 MobiDBLite consensus disorder prediction 573 592 - -
Lal21g0308 811 MobiDBLite consensus disorder prediction 442 456 - -
Lal21g0308 811 SUPERFAMILY ARM repeat 74 262 IPR016024 -
Lal21g0308 811 MobiDBLite consensus disorder prediction 777 800 - -
Lal21g0308 811 Gene3D - 607 660 - -
Lal21g0308 811 MobiDBLite consensus disorder prediction 350 592 - -
Lal21g0308 811 MobiDBLite consensus disorder prediction 287 310 - -
Lal21g0308 811 Pfam Sister chromatid cohesion protein PDS5 protein 41 246 - -
Lal21g0308 811 PANTHER TRANSCRIPTIONAL REGULATOR 18 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0308 Lal-Chr21 2038983 2047840 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0308 - - lang:109343777 1207.97