Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0300 ATGCATCCTCCAACTACTGTTCAACAAGAACACACTCTTGTTCTTGATTTCGCTTCCCACATTGGTCGCTTTACATTTCATTCTTCCAATTTTCTCAACTTATTTTCACATTCCTCCTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCACTCTCCTTCTATTATTTTCAATTCCTCGACCTTCAAAACTACTCGTGTCAGAAACCCTGCTTCTCTCAGCTTGAATTTTGGAGGGAAAGGGGATTTCAATTTCAGGAGGGTTTTCACTGACTTCAACACTGCTATTCGTTTTCACTGCCACAAATCACCAATTGGGTTTGCTTCATTGGGTATTGATTCAGGGGATGGTAATAACAATAATAACAATAGTGGGTTGGTAGAAGATGTTTGTGATGTTATTGATAATGATGGAAATTCACCCAATGGTGTTCAGAGTCATAAGCCCAAGAAAGTTTTGATTTTGATGAGTGATACTGGTGGTGGTCATCGAGCTTCTGCAGAAGCTATTAAGGCTGCTTTTTATGAAGAATATGGAGATGAATACCAGGTGTTTGTTTCTGATTTATGGTCTGAGCACACGCCTTGGCCATTTAATCAACTTCCTAAGAGCTATAGTTTTTTGGTGAAACATGGGTCTTTGTGGAAAATGACTTATTATGGAACTGCCCCACGTGTAGTGCATCAGTCTAATTTTGCTGCAACTTCAGCATTCATAGCTCGCGAGGTTGCTAAGGGGCTAATGAAATATCAGCCAGATATAATAATCAGTGTGCATCCTTTGATGCAACATGTTCCACTTCGTATTTTGAAGACAAGAGGTCTTTTAAAGAAGATCGTTTTTACCACAGTTGTCACAGATTTAAGCACCTGCCATCCTACATGGTTTCATAAGCTTGTAACCAGATGCTATTGTCCGACAACAGAACTTGCAAAAAGGGCACTCAAAGCTGGACTTCAGAAATCACAAATAAAGATTTATGGTCTGCCCGTGCGACCTTCTTTTGTTAAGCCGGTTCAGCCAAAGGATGAACTAAGGAGATTGTTAGGCATGGATGAGGATCTTCCTTCCGTATTGTTGATGGGGGGAGGTGAAGGTATGGGCCCAATTGAGGCTACTGCTCGGGCACTTGGAGATATGTTATACGATGAAAGCCTTGGGGCTCCTGTTGGTCAAGTTCTTATTATTTGTGGTCGTAATAAGAAGCTTGCTGATAAATTGCGTTCAATTAATTGGAAGGTTCCTGTTCAGCATTTCTCCAGTGGCGTTTGGGATGGAGGAGCTGCTCACAGAGACTGTGGACTCGTCAAGATCAAGGGATTTGTCAACAAAATGGAAGAATGCATGGGAGCTTGTGATTGCATCATTACAAAAGCTGGACCAGGGACGATTGCAGAGGCCATGATCCGAGGCCTGCCAATTATTTTGAATGGTTATATTGCTGGCCAGGAAGCTGGCAATGTACCCTACGTAGTTGAAAATGGATGTGGCAAGTTCACTAAATCTCCTAAGGAAATAGCAAAATATGTTTCCGAGTGGTTTGGTCCAAAAGCCGATGAGTTGAAAGCAATGTCACAAAATGCATTGAAGCTAGCTAGGCCAGATGCTGTGTTCAAGATTGTTCGTGACCTTCATCAGCTTGTCAAAGAAAGAAGTTTGCTTCTAGAGTACTCTTGTACAGCTTAA 1689 0.4156 MHPPTTVQQEHTLVLDFASHIGRFTFHSSNFLNLFSHSSSSSSSSSSSSSSHSPSIIFNSSTFKTTRVRNPASLSLNFGGKGDFNFRRVFTDFNTAIRFHCHKSPIGFASLGIDSGDGNNNNNNSGLVEDVCDVIDNDGNSPNGVQSHKPKKVLILMSDTGGGHRASAEAIKAAFYEEYGDEYQVFVSDLWSEHTPWPFNQLPKSYSFLVKHGSLWKMTYYGTAPRVVHQSNFAATSAFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILKTRGLLKKIVFTTVVTDLSTCHPTWFHKLVTRCYCPTTELAKRALKAGLQKSQIKIYGLPVRPSFVKPVQPKDELRRLLGMDEDLPSVLLMGGGEGMGPIEATARALGDMLYDESLGAPVGQVLIICGRNKKLADKLRSINWKVPVQHFSSGVWDGGAAHRDCGLVKIKGFVNKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVENGCGKFTKSPKEIAKYVSEWFGPKADELKAMSQNALKLARPDAVFKIVRDLHQLVKERSLLLEYSCTA 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0300 562 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 88 553 - -
Lal21g0300 562 CDD GT28_Beta-DGS-like 153 549 - -
Lal21g0300 562 Gene3D Glycogen Phosphorylase B; 341 533 - -
Lal21g0300 562 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 151 549 - -
Lal21g0300 562 Pfam Monogalactosyldiacylglycerol (MGDG) synthase 164 332 IPR009695 GO:0009247|GO:0016758
Lal21g0300 562 Pfam Glycosyltransferase family 28 C-terminal domain 437 520 IPR007235 GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0300 Lal-Chr21 1984504 1990225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0300 1 562 Glycosyltransferase AT4G31780 62.669 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0300 K03715 - gmx:100804814 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0300 21 1984504 1990225 Lal21g0300 21 1984504 1990225 ECH