Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0284 ATGCTATCTTTTGTAACAGAAAATATGGGCTTACTCTGCAGCAGAAATCGTCGTTATAATGACGCTGATGCTGAAGAAAGCGCGCAGGCTGCAGACATTGAAAGAAGAATAGAGTTAGAAACAAAGGCTGAAAAGCACATTCAGAAACTCCTACTACTGGGCGCTGGAGAGTCAGGGAAGTCTACAATATTTAAGCAGGCAAGAAATTACATTATAAAACTTTTGTTTCAAACTGGCTTTGACGAGGCAGAGCTAAAGAGCTACATACCGGTCATTCATGCTAATGTGTATCAGACAATAAAATTACTGCATGATGGGTCAAAGGAGTTGGCTCAGAACGATGTTGATTCTTCAAAGTATGTTATATCTAATGAAAACAAGGACATTGGTGAAAAACTCTCAGAAATAGGAGGGAGGCTGGATTACCCATATCTCACCATGGAACTTGCAAAGGAAATAGAGACTCTGTGGGAGGATGCTGCAATTCAGGAAACATATGCCCGTGGCAATGAACTCCAAGTTCCAGACTGTGCTCATTATTTTATGGAAAATTTGCAAAGGTTGTCTGATCCGAACTACATTCCGACAAAGGATGATGTTCTATATGCAAGAGTTCGTACAACTGGTGTTGTAGAGATACAGTTCAGCCCTGTTGGTGAAAATAAGAGAAGTGGCGAAGTCTATAGACTCTTTGATGTTGGTGGCCAGAGAAATGAGAGGAGAAAATGGATCCATCTTTTCGAAGGAGTTTCGGCTGTAATATTCTGTGCTGCTATTAGCGAGTATGACCAAACTCTTTTTGAGGATGAAAACAAGAACAGAATGACCGAGACTAAGGAACTTTTTGAGTGGATCCTGAAGCAACCATGTTTTGAGAAAACATCGTTCATGTTATTTTTGAACAAGTTTGACATATTCGAGAAGAAGATCCTGAAAGTCCCACTCAATGTTTGTGATTGGTTCAAAGATTACCAGCCAGTTTCAACAGGGAAACAAGAGATTGAGCTTGCATATGAGTTTGTGAAGAAAAAGTTTGAGGAATTATATTTCCAAAGCACTGCTCCTGATCGTGTGGATCGTGTGTTTAAGGTCTATCGGACCACTGCCCTTGATCAGAAGCTCGTCAAGAAGACTTTCAAACTTGTTGATGAGACTTTGAGGCGAAGGAATCTCTTTGAAGCTGGTTTATTATGA 1194 0.4028 MLSFVTENMGLLCSRNRRYNDADAEESAQAADIERRIELETKAEKHIQKLLLLGAGESGKSTIFKQARNYIIKLLFQTGFDEAELKSYIPVIHANVYQTIKLLHDGSKELAQNDVDSSKYVISNENKDIGEKLSEIGGRLDYPYLTMELAKEIETLWEDAAIQETYARGNELQVPDCAHYFMENLQRLSDPNYIPTKDDVLYARVRTTGVVEIQFSPVGENKRSGEVYRLFDVGGQRNERRKWIHLFEGVSAVIFCAAISEYDQTLFEDENKNRMTETKELFEWILKQPCFEKTSFMLFLNKFDIFEKKILKVPLNVCDWFKDYQPVSTGKQEIELAYEFVKKKFEELYFQSTAPDRVDRVFKVYRTTALDQKLVKKTFKLVDETLRRRNLFEAGLL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0284 397 CDD G-alpha 48 391 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lal21g0284 397 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-1 SUBUNIT 9 397 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lal21g0284 397 SUPERFAMILY Transducin (alpha subunit), insertion domain 80 205 IPR011025 GO:0007165
Lal21g0284 397 PRINTS Plant G protein alpha subunit signature 35 44 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lal21g0284 397 PRINTS Plant G protein alpha subunit signature 105 119 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lal21g0284 397 PRINTS Plant G protein alpha subunit signature 129 143 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lal21g0284 397 PRINTS Plant G protein alpha subunit signature 213 228 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lal21g0284 397 PRINTS Plant G protein alpha subunit signature 283 294 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lal21g0284 397 PRINTS Plant G protein alpha subunit signature 332 347 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lal21g0284 397 PRINTS Plant G protein alpha subunit signature 349 361 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Lal21g0284 397 ProSiteProfiles G-alpha domain profile. 46 397 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lal21g0284 397 Gene3D - 49 385 IPR027417 -
Lal21g0284 397 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 394 IPR027417 -
Lal21g0284 397 SMART galpha_1 27 396 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lal21g0284 397 Gene3D - 81 206 IPR011025 GO:0007165
Lal21g0284 397 PRINTS Alpha G protein (transducin) signature 49 64 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lal21g0284 397 PRINTS Alpha G protein (transducin) signature 193 215 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lal21g0284 397 PRINTS Alpha G protein (transducin) signature 228 245 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lal21g0284 397 PRINTS Alpha G protein (transducin) signature 250 278 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lal21g0284 397 PRINTS Alpha G protein (transducin) signature 296 305 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lal21g0284 397 Pfam G-protein alpha subunit 31 385 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Lal21g0284 397 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 9 397 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0284 Lal-Chr21 1879275 1884931 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0284 K19729 - gmx:100781223 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0284 21 1879275 1884931 Lal21g0284 21 1879275 1884931 ECH