Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0280 ATGGCTTCTACTTCTGTTTCAATGTCTTTGCCACTAACCACTGTTACTCACAACAAGCTCATTCAACCATCCTCTCTATCGCCATTACCCATAAGACAACAAAAAACTACCCTCATTTCAAAACCCAACCTTGGAATTCAAGCATCTTTGAAGGAAAAAGCAGTGACAGTTATTACAGTTGCTTCATTAACTGCATCAATGGTTATACCTGAAGTTGCTCATGCTGCTACCTCTGATCTCTCTCCATCACTTCAGAGCTTCTTGTTCAGCACTTTTGCTGGTGGTGTTGTGCTATTTGGTTTACTTGGTGCTGTTCTTGGTGTTTCCAAATTTGATCCTGTTAAGAGAACCTAG 354 0.4068 MASTSVSMSLPLTTVTHNKLIQPSSLSPLPIRQQKTTLISKPNLGIQASLKEKAVTVITVASLTASMVIPEVAHAATSDLSPSLQSFLFSTFAGGVVLFGLLGAVLGVSKFDPVKRT 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0280 117 PANTHER OS07G0673550 PROTEIN 2 117 - -
Lal21g0280 117 PANTHER OS07G0673550 PROTEIN 2 117 - -
Lal21g0280 117 Gene3D Single helix bin 80 117 - -
Lal21g0280 117 Pfam Photosystem II reaction centre X protein (PsbX) 81 116 IPR009518 GO:0009523|GO:0015979|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0280 Lal-Chr21 1853728 1854081 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0280 - - mtr:MTR_1g015290 123.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0280 21 1853728 1854081 Lal21g0280 21 1853728 1854081 ECH