Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0270 ATGGAATCTTCACAAGGGTCTAGGTCTACTACTACTACTACTACGTTGGCTGGTTTGGTTGAAAATGCATCATCAATTCAGAGGAATCGGGATGAGACTTGTGTTGATGGAATCCCTATTTATGTTAAGGAACTCATTGCCGGTGGTTTCGCCGGTGCTCTTTCTAAAACCACCGTTGCACCCCTTGAACGTGTCAAGATACTTTGGCAGGTATTTGAATCCATTGTTGGGAAATTCAGAACCAATTTCCCTCCTCTGTGTGATGCAAAATGGGCATTTCGGAAGCGGCAAGTGAATAAGACAAGAATAGCAGGATTTCACACTCTTGGTGTGTATCAATCATTGAATAAGTTAGTAAAGCATGAAGGCTTTGTAGGATTATATAAAGGAAATGGAGCTAGTGTTATCCGGATTATTCCATATGCAGCCTTGCATTTTATGACATATGAGCGGTATAAAAGTTGGATCTTGAATAATTATTCTGTGTTGGGGACAGGGCCTTTTATTGATCTTTTAGCTGGCTCGGCTGCCGGAGGAACTTCAGTTTTATGCACATACCCCTTAGATCTTGCTCGCACTAAACTTGCTTATCAGGTGACAGACACTAGAAGTATTGAAAATGGTATGAAGGGAGTTCATTCTCGACCTGTACATAATGGCATTAAAAGCGTACTTACAAGCGTCTATAAGGAAGGGGGGTTTCGTGGACTTTATAGGGGTGCTGGACCAACCCTTACTGGAATTCTTCCATATGCTGGTTTAAAGTTCTACATGTATGAGAAGTTGAAATTGCATGTTCCTGAAGAACATCAAAAGTCCATTTTGATGCGCCTTTCTTGTGGAGCTCTTGCTGGGTTGTTTGGACAGACTTTAACATACCCTTTAGATGTTGTTAAGAGACAGATGCAGGTTGGAAACCTGCAAAATGCATCTCATGAAAATGTCGTATACAGAAATACACTTGATGGACTTAGGACGATTGTTCGTAATCAAGGATGGAGACAATTGTTTGCAGGCATTGTTCCTTCAGCTGCAATTAGTTTCACCACATATGACATGATGAAAGCTTGGCTTGGTGTTCAACCTCAACAAAAATCTCGACCAGTTTCTGCAGCATGA 1119 0.4129 MESSQGSRSTTTTTTLAGLVENASSIQRNRDETCVDGIPIYVKELIAGGFAGALSKTTVAPLERVKILWQVFESIVGKFRTNFPPLCDAKWAFRKRQVNKTRIAGFHTLGVYQSLNKLVKHEGFVGLYKGNGASVIRIIPYAALHFMTYERYKSWILNNYSVLGTGPFIDLLAGSAAGGTSVLCTYPLDLARTKLAYQVTDTRSIENGMKGVHSRPVHNGIKSVLTSVYKEGGFRGLYRGAGPTLTGILPYAGLKFYMYEKLKLHVPEEHQKSILMRLSCGALAGLFGQTLTYPLDVVKRQMQVGNLQNASHENVVYRNTLDGLRTIVRNQGWRQLFAGIVPSAAISFTTYDMMKAWLGVQPQQKSRPVSAA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0270 372 SUPERFAMILY Mitochondrial carrier 42 353 IPR023395 -
Lal21g0270 372 Gene3D Mitochondrial carrier domain 40 361 IPR023395 -
Lal21g0270 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 39 155 IPR018108 -
Lal21g0270 372 PANTHER SOLUTE CARRIER FAMILY 25 96 366 - -
Lal21g0270 372 PANTHER SOLUTE CARRIER FAMILY 25 26 71 - -
Lal21g0270 372 PANTHER GRAVES DISEASE MITOCHONDRIAL SOLUTE CARRIER PROTEIN-LIKE 96 366 - -
Lal21g0270 372 PANTHER GRAVES DISEASE MITOCHONDRIAL SOLUTE CARRIER PROTEIN-LIKE 26 71 - -
Lal21g0270 372 Pfam Mitochondrial carrier protein 166 266 IPR018108 -
Lal21g0270 372 Pfam Mitochondrial carrier protein 272 358 IPR018108 -
Lal21g0270 372 Pfam Mitochondrial carrier protein 41 159 IPR018108 -
Lal21g0270 372 PRINTS Mitochondrial carrier protein signature 44 57 IPR002067 GO:0055085
Lal21g0270 372 PRINTS Mitochondrial carrier protein signature 57 71 IPR002067 GO:0055085
Lal21g0270 372 PRINTS Mitochondrial carrier protein signature 180 198 IPR002067 GO:0055085
Lal21g0270 372 PRINTS Mitochondrial carrier protein signature 238 256 IPR002067 GO:0055085
Lal21g0270 372 PRINTS Mitochondrial carrier protein signature 281 303 IPR002067 GO:0055085
Lal21g0270 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 165 265 IPR018108 -
Lal21g0270 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 272 364 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0270 Lal-Chr21 1791342 1799551 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0270 147 368 Organic Solute Cotransporters AT1G14560 65.948 2.63e-107 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0270 - - lang:109343818 616.69