Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0262 ATGATTGCACCGTCAATTAATGGTGTTTTGTCAAATCCTAGGTTTCAAAGTTTTCATTCCAAAATTTCACCGTCAAGTTCTGAAATCAGAAATCTTACTTATGTCACCTGCCACTCAGATTCTAACAAGTCTACATCTCAAGCATCCTTGTTTTTGTGTCCTGCCTCCACGAATAGAACAAATGGCGTGCTTCGGAGTCCTTTTTGTTGGGATAGGAGAAACTTGATTGGTCAAGCATCTTATTCTGTGGGTACAACTACTTTGGATGGGGTTCATTTAGAAACTCCTTCGCATGTTGGTGAAGAAAAGGTTGGAGTGCTGCTTCTCAATCTAGGAGGACCAGAGACACTGAATGATGTTCAACCTTTTCTGTTCAATCTTTTCGCTGATCCTGATATCATTCGTCTCCCAAGGTTGTTTCAGTTTCTCCAGCAACCGTTGGCAAAATTGATTTCTGTGCTTCGGGCTCCCAAATCCAAGGAAGGGTATGCTGCTATAGGAGGTGGCTCTCCTTTGCGCAAAATTACTGATGATCAGGCACTTGCACTTAAAAAGGCTTTGGAATCAAAAGGCCTCTCTTCAAATGTCTATGTTGGGATGCGATACTGGTACCCATTCACTGAAGAAGCCGTTGAGCAAATTAAGAGGGATGGAGTAACAAGGCTTGTGGTGCTTCCTCTTTATCCCCAGTTTTCTATATCCACAACTGGGTCAAGCATCCGTGTTCTTCAGCAGATGTTCAGGGAAGATGAATATTTGTCTAGCCTTCCTGTTTCTGTTATAAACTCTTGGTACCAACGAGAAGGTTACATTAAGTCTATGGCTGACTTAATTGAGAAGGAGCTCATGAGATTTTCTGGGCCTGAGGAGGCAATGATATTTTTCAGTGCCCACGGTGTGCCTGTCAGTTATGTTGAGGATGCGGGGGATCCATACCGAGATCAAATGGAGGATTGCATTTTCTTGATCATGCAGGAATTGAAAGCTAGAGGAATTAATAATGAGCACACTCTTGCTTATCAGAGTCGAGTGGGTCCTGTACAGTGGCTGAAACCATATACAGATGAAGTTCTCGTTGAGCTCGGCCAAAAAGGTGTTAAGAGTCTTTTAGCTGTTCCAGTGAGCTTTGTGAGTGAGCATATTGAGACACTTGAAGAAATTGACATGGAGTACAAGGAATTGGCTCTTGAATCTGGCATCAAGAATTGGGCACGTGTCCCTGCCCTCGGTCTCACCCCCTCCTTCATCACAGATCTTGCAGATGCAGTAATTGAAGCTCTTCCATCAGCAACAGCATTGTATGCTCCAACTAGCACCTCTGAAGATCTTGATCAAGACCCAATTACATATTTCATCAAGATTTTCCTTGGTTCAATCTTGGCATTCTTCTTGTTTTTGTCACCAAAGCTGATAATGTCATTCAAGAATCACGGCTTCTAG 1440 0.4299 MIAPSINGVLSNPRFQSFHSKISPSSSEIRNLTYVTCHSDSNKSTSQASLFLCPASTNRTNGVLRSPFCWDRRNLIGQASYSVGTTTLDGVHLETPSHVGEEKVGVLLLNLGGPETLNDVQPFLFNLFADPDIIRLPRLFQFLQQPLAKLISVLRAPKSKEGYAAIGGGSPLRKITDDQALALKKALESKGLSSNVYVGMRYWYPFTEEAVEQIKRDGVTRLVVLPLYPQFSISTTGSSIRVLQQMFREDEYLSSLPVSVINSWYQREGYIKSMADLIEKELMRFSGPEEAMIFFSAHGVPVSYVEDAGDPYRDQMEDCIFLIMQELKARGINNEHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAVPVSFVSEHIETLEEIDMEYKELALESGIKNWARVPALGLTPSFITDLADAVIEALPSATALYAPTSTSEDLDQDPITYFIKIFLGSILAFFLFLSPKLIMSFKNHGF 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0262 479 Hamap Coproporphyrin III ferrochelatase [cpfC]. 102 427 IPR001015 GO:0004325|GO:0006783
Lal21g0262 479 Gene3D - 265 408 - -
Lal21g0262 479 TIGRFAM hemH: ferrochelatase 101 426 IPR001015 GO:0004325|GO:0006783
Lal21g0262 479 CDD Ferrochelatase_N 104 266 IPR033659 -
Lal21g0262 479 Pfam Ferrochelatase 103 426 IPR001015 GO:0004325|GO:0006783
Lal21g0262 479 Gene3D - 103 427 - -
Lal21g0262 479 SUPERFAMILY Chelatase 102 433 - -
Lal21g0262 479 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 32 477 - -
Lal21g0262 479 CDD Ferrochelatase_C 274 410 IPR033644 -
Lal21g0262 479 ProSitePatterns Ferrochelatase signature. 293 312 IPR019772 GO:0004325|GO:0006783
Lal21g0262 479 PANTHER FERROCHELATASE 32 477 IPR001015 GO:0004325|GO:0006783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0262 Lal-Chr21 1746395 1749631 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0262 K01772 - gmx:100813423 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0262 21 1746395 1749631 Lal21g0262 21 1746395 1749631 ECH