Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0239 ATGGTGTTTGGGCAAATAGTAATTGGTCCCCCTGGCTCTGGTAAAACAACTTACTGCAATGGCATGTCTCAGTTCCTAAATCTTATCGGAAGGAAGGTTGCCATTATCAATTTGGATCCAGCTAATGATTTATTACCGTATGAATGTGCTGTGAACATCGAGAATCTTGTGAAACTTAGTGATGTAATGGTGGAACATTCTCTTGGTCCTAATGGGGGTCTTGTGTATTGTATGGATTATCTAGAGAAAAATATTGATTGGTTGCAAGCAAAGTTGGAACCTCTGCTGAAAGATCACTACCTACTCTTTGATTTTCCTGGACAAGTGGAACTCTTTTTTCTTCATTCAAATGCCAAGAATGTCATCATGAAACTCATAAAGAAATTGAACCTAAGGTTAACTGCAGTGCATTTGATTGATGCTCATCTTTGCAGTGACCCTGGAAAGTATATTAGTGCATTGGTTCTATCCTTATCCACGATGCTGCATCTAGAACTTCCCCATGTAAACGTCTTGTCAAAAATTGATTTGATCGAGAGCTATGGAAGACTAGCCTTTAACCTCGATTTCTATACAGACGTGCAAGACTTGTCATATTTACAATACCATCTTGATCAGGACCCTCGCTCTGCTAAGTATAGAAAGCTCACAAAGGAATTGTGTGATGTTATTGATAACTTTGGTCTTGTAAATTTTTCAACCTTAGATATTCAGGACAAAGAGAGTGTAGGTAATTTAGTGAAGCTGATAGACAAAAGCAATGGGTACATATTTGCCGGCATAGATGCAAGTGCAGTTGAATTTAGCAAGATTGCAGTTGGTCCTGTTGATTGGGATTATTATAGATATCCTTTTTGGTCATGA 864 0.3819 MVFGQIVIGPPGSGKTTYCNGMSQFLNLIGRKVAIINLDPANDLLPYECAVNIENLVKLSDVMVEHSLGPNGGLVYCMDYLEKNIDWLQAKLEPLLKDHYLLFDFPGQVELFFLHSNAKNVIMKLIKKLNLRLTAVHLIDAHLCSDPGKYISALVLSLSTMLHLELPHVNVLSKIDLIESYGRLAFNLDFYTDVQDLSYLQYHLDQDPRSAKYRKLTKELCDVIDNFGLVNFSTLDIQDKESVGNLVKLIDKSNGYIFAGIDASAVEFSKIAVGPVDWDYYRYPFWS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0239 287 CDD GPN2 3 252 - -
Lal21g0239 287 Gene3D - 4 263 IPR027417 -
Lal21g0239 287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 255 IPR027417 -
Lal21g0239 287 PANTHER XPA-BINDING PROTEIN 1-RELATED 1 280 IPR004130 -
Lal21g0239 287 Pfam Conserved hypothetical ATP binding protein 7 255 IPR004130 -
Lal21g0239 287 PANTHER GPN-LOOP GTPASE 2 1 280 IPR030231 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0239 Lal-Chr21 1585136 1589340 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0239 K24104 - gmx:100799782 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0239 21 1585136 1589340 Lal21g0239 21 1585136 1589340 ECH