Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0229 ATGAAGGAAGAGGAGCAACTGTGTGAAGCGGCGAAGAAGGGTGAAACAGAGAAAGTGAAGACTCTGATAGAATCAGGTGCTGACGTCACCTATTTCGATGAGGAAGGGTTCACTCCTCTGATGCACGCTGCAAAGCATGGCCACGCTTCCGTCATCACCACCCTTCTCTCCGCCGGTGCTCCATGGAACGCACTTTCTCCTTCCAATTACTCCGCCGGTGATTTTGCAATGGAATCAGGTCACGACGATTCCTTCGAGATTCTCCTCAATGCCGGGATTCAAGCTGAACTGGTCCTGGGTACCATTGCTCGGAAAGAAAATCAAAATGGGAATTCAGGTCATGATTATTTGGAAGATAGGGTAAGCTTTAGTGAAGATAAAATTATGGACTATGATAGCAAAGCTGTCATGATGGCATGGGAGAAGCCATTGATGGAGGCTCATGCTAAAGCTGTTTGTTCAGGTGGTGGTCACATACTCAATATTGGATTTGGAATGGGGCTTGTGGATACCGCCATCCAGCTGTACAAACCTGTCACACACACCATTGTTGAGGCTCACCCTGAGGTTTATGAACGCATGATTCAAACTGGCTGGGGTCAGAAGGAAAATGTGAAGATCGTTTTTGGCCGCTGGCAAGATGTTCTTCCTCAGCTTCAAACATATGATGGAATTTTCTTCGATACGTATGGGGAGTACTATGAAGACCTGAGAGAATTCCACCACCACCTTCCAACACTGTTGAGGCCTGGTGGAATATATTCATTCTTCAATGGGCTTTGTGGTGGTAATGCATTTTTCCATGTTGTCTACTGCAATTTGGTATCTCTCGAACTTGAGAATTTGGGGTATTCCACACAATTAATTCCCTTGCCAGTTAAGGATTGTTTAGGAGATGAAGTTTGGGAAGGTGTGAAACACAGATATTGGCAGCTTGATACATACTACCTCCCTGTCTGTCAGTCTGCGGAGGACTCTGAGTGA 984 0.4593 MKEEEQLCEAAKKGETEKVKTLIESGADVTYFDEEGFTPLMHAAKHGHASVITTLLSAGAPWNALSPSNYSAGDFAMESGHDDSFEILLNAGIQAELVLGTIARKENQNGNSGHDYLEDRVSFSEDKIMDYDSKAVMMAWEKPLMEAHAKAVCSGGGHILNIGFGMGLVDTAIQLYKPVTHTIVEAHPEVYERMIQTGWGQKENVKIVFGRWQDVLPQLQTYDGIFFDTYGEYYEDLREFHHHLPTLLRPGGIYSFFNGLCGGNAFFHVVYCNLVSLELENLGYSTQLIPLPVKDCLGDEVWEGVKHRYWQLDTYYLPVCQSAEDSE 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0229 327 PIRSF Rmt2 103 324 IPR017408 GO:0016274
Lal21g0229 327 PIRSF Rmt2 1 114 IPR017408 GO:0016274
Lal21g0229 327 SUPERFAMILY Ankyrin repeat 7 95 IPR036770 -
Lal21g0229 327 SMART ANK_2a 35 64 IPR002110 GO:0005515
Lal21g0229 327 SMART ANK_2a 68 97 IPR002110 GO:0005515
Lal21g0229 327 SMART ANK_2a 2 31 IPR002110 GO:0005515
Lal21g0229 327 ProSiteProfiles Arginine and arginine-like N-methyltransferase domain profile. 107 327 IPR026480 -
Lal21g0229 327 CDD AdoMet_MTases 159 254 - -
Lal21g0229 327 ProSiteProfiles Ankyrin repeat region circular profile. 35 60 - -
Lal21g0229 327 Gene3D - 1 118 IPR036770 -
Lal21g0229 327 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 320 IPR029063 -
Lal21g0229 327 Gene3D Vaccinia Virus protein VP39 119 323 IPR029063 -
Lal21g0229 327 ProSiteProfiles Ankyrin repeat profile. 2 34 IPR002110 GO:0005515
Lal21g0229 327 Pfam Ankyrin repeats (3 copies) 7 94 IPR002110 GO:0005515
Lal21g0229 327 PANTHER GUANIDINOACETATE N-METHYLTRANSFERASE 3 322 - -
Lal21g0229 327 ProSiteProfiles Ankyrin repeat profile. 35 67 IPR002110 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0229 K18477 - gmx:100527621 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0229 21 1514960 1521195 Lal21g0229 21 1514960 1521195 ECH