LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal21g0223	ATGGGAAATCCAAACGTAAGTGGTGATGCTGAGGTTACAGAGAATTCGATTAACTCTGATTCTGATTTGCACGATTCACCTCCTTACGCTGAAGGAGAAAAGGTCTTCGCTTACCACTCTAATCGACTCTATGAAGCCAAGGTCATGCGATTGGATTACAAGCAAAAAAGTTGGAAGTTCTATGTTCATTATCTTGGTTGGAAGAATAGCTGGGACGAGTGGGTTGATATGGCTAGCTTGATGAAACACACGGAGGAAAGTAAGCGTAAAAAAGACGAGCTTGATGAGAAGCTTGGGAATGACAAGAATACGAAATTCGCCCGTGCAGGGAAGACTTCAAATGCAGCAAAAGGCAGGAAGCGAAGGAATGAATCTTCGAGTAAGGGAAAATCTGAAGCAAATTCTGACAAGCTTACCACTATTCAGATTCCACCAACACTAAAGAAGCAATTGGTTGATGATTGTGAATTTGTCACGCATTTGGGCAAGCTCGTTAAACTTCCTCGTACTCCTAATGTGAATGACATATTGAAGATGTATCTCGATCAGAGATTGAAGAAACATGGCTCGGTATCAGATTCAGTTGAAGAAATAATGAATGGATTGGGTTCTTACTTTGATAAAGCACTGCCAGTGATTCTCTTATACAATAATGAGCGTCATCAGTACCAAGAAGCATGTCCAAATAATATCACCCCTTCTAGTATATATGGTGCTGAGCATTTGTTACGTCTCCTTGTCAAGTTGCCTGAGTCAATGGCTGATGCTGGTATTGAAAAGGAGACAGTGAAAGAAATTCAGGAACAGACAGTTGACTTTCTCAGGTTCTTGCAAAGAAATCATAGCGCATTTTTCCTTTCTACTTATCATGTTCCTGAGGATATGGATAACAAAAACAACAAACAAGGTGAGTAG	915	0.4044	MGNPNVSGDAEVTENSINSDSDLHDSPPYAEGEKVFAYHSNRLYEAKVMRLDYKQKSWKFYVHYLGWKNSWDEWVDMASLMKHTEESKRKKDELDEKLGNDKNTKFARAGKTSNAAKGRKRRNESSSKGKSEANSDKLTTIQIPPTLKKQLVDDCEFVTHLGKLVKLPRTPNVNDILKMYLDQRLKKHGSVSDSVEEIMNGLGSYFDKALPVILLYNNERHQYQEACPNNITPSSIYGAEHLLRLLVKLPESMADAGIEKETVKEIQEQTVDFLRFLQRNHSAFFLSTYHVPEDMDNKNNKQGE	304

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal21g0223	304	MobiDBLite	consensus disorder prediction	117	131	-	-
	Lal21g0223	304	Coils	Coil	77	97	-	-
	Lal21g0223	304	Gene3D	MRG domain	134	302	IPR038217	-
	Lal21g0223	304	Pfam	RNA binding activity-knot of a chromodomain	31	80	IPR025995	-
	Lal21g0223	304	PIRSF	EAF3_MRG15	23	302	IPR008676	GO:0005634\|GO:0006325\|GO:0006355
	Lal21g0223	304	MobiDBLite	consensus disorder prediction	85	104	-	-
	Lal21g0223	304	PANTHER	CHROMATIN-BINDING PROTEIN	8	303	-	-
	Lal21g0223	304	SUPERFAMILY	Chromo domain-like	25	159	IPR016197	-
	Lal21g0223	304	MobiDBLite	consensus disorder prediction	1	28	-	-
	Lal21g0223	304	MobiDBLite	consensus disorder prediction	1	23	-	-
	Lal21g0223	304	Gene3D	-	13	110	-	-
	Lal21g0223	304	ProSiteProfiles	MRG domain profile.	135	302	IPR026541	-
	Lal21g0223	304	MobiDBLite	consensus disorder prediction	85	140	-	-
	Lal21g0223	304	PANTHER	MORTALITY FACTOR 4-LIKE PROTEIN	8	303	IPR008676	GO:0005634\|GO:0006325\|GO:0006355
	Lal21g0223	304	Pfam	MRG	120	289	IPR026541	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal21g0223	Lal-Chr21	1471805	1476018	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal21g0223	K11339		-	gmx:100777259	393.275

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal21g0223	21	1471805	1476018	Lal21g0223	21	1471805	1476018	ECH