Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0216 ATGGCTGCTCCTCTTTTTCTGAGACAATTTTTGCTGCTACGTGTTCACGTGTATAACTATAAACGGTTTACTTTCAGGGACGTTGCACTGCCTCACCGACTATGGTGCAGCGCCGCCACCAACCAACCGTTGAATGAAGATGAAGACAAAGTAGTTAACTTTGTAAGAGCCAAGGAGGTATCAAATTACCCGCGCTGGGATGACCCCGATTATAGGAAATGGAAGGATAAAGAAAAGGAAATCCTCAGTGACATTGAACCTATCATTTTACTAACCAAAGATATTCTCCACTCCAGAAGGTACTTGGATGGAGAGCAACTTAGTGTGGAGGATGAGAAAGTTGTAGTAGAGAGGCTCCTTGCTTACCATCCACAAACTCAAGATAAGATTGGTTCTGGTCTTGATTCCATTATGGTTGATCGTCATCCCCAATTTCGACACTCAAGGTGTCTTTTTGTGGTAAGAACCGATGGCGGCTGGATTGATTTCTCATATCAGAAGTGCCTTCGAGAATACATCAGATATAAGTACCCAACTCATGCAGAAAGGTTCATTCGAGAATATTTTAAGCGTGGGAGCGGTTGA 585 0.4325 MAAPLFLRQFLLLRVHVYNYKRFTFRDVALPHRLWCSAATNQPLNEDEDKVVNFVRAKEVSNYPRWDDPDYRKWKDKEKEILSDIEPIILLTKDILHSRRYLDGEQLSVEDEKVVVERLLAYHPQTQDKIGSGLDSIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLREYIRYKYPTHAERFIREYFKRGSG 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0216 194 Pfam Protein of unknown function (DUF3223) 93 169 - -
Lal21g0216 194 PANTHER DCL PROTEIN (DUF3223) 1 192 - -
Lal21g0216 194 Gene3D - 82 177 - -
Lal21g0216 194 PANTHER - 1 192 IPR044673 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0216 Lal-Chr21 1417314 1419769 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0216 - - gmx:100818770 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0216 21 1417314 1419769 Lal21g0216 21 1417314 1419769 ECH
Lal8g0652 8 4599999 4602477 Lal21g0216 21 1417314 1419769 PCT
Lal21g0216 21 1417314 1419769 Lal8g0652 8 4599999 4602477 PCT