Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0186 ATGGAGAGAGCAAAGTCATCCCTTCTACACCTTCAGCCTCCAACCTATGGAAAACTAATCACTATTCTCAGCATTGATGGAGGTGGTATTAGGGGCATTATCCCAGCAACCATTCTTGCTTTCCTTGAATCTCAACTTCAGGAATTGGATGGTGAGGATGCAAGACTTGCAGATTACTTTGATGTAATCACTGGAACAAGCACAGGTGGTCTTGTAACTGCTATGTTAAGTACTCCAAATGAAGAAAAACGACCACTTTTTGCAGCCAAGGATATCAAACCCTTTTATTTGGAACATGGCCCAAATATTTTCCCACAACCAAAATGCTTATGGGGGACAACACCAGGAAAGTTTCTAAAGTCATTAATAGGGCCAAAATATAATGGGAAATACCTCCATGGACTGATAAAAGAGAGGCTGAGAGAAACTCGTGTGCATGAGACACTCACCAACGTTGTAATTCCTACCTTTGACATCAAGACAATGCAACCAACCATCTTCTCTTCTTATAAGATTAAAAGGTTCCCTTATATGAATGCTCAACTCTCTGACATATGCATTAGCACTTCTGCTGCACCTACTTATCTTCCTGCTTACTACTTCAAGAACCAATACCACATAGAGAAAATACATGAATTCAACCTTATAGATGGTGGTGTTTATGCAAATAATCCGACTTTAGTTGCAGTGAATGAAGTAATAAAGCAGATTGTTAATGATAATCCAGATTTCTTTCCCATCAAACCCTTGGACTATGGTCGATTCGTCATAATTTCATTAGGCACCGGGGCACCCAAGAATGAACAGAAATTCAATGCAAACATGGCAGCTAAATGGGGTCTTTTGGGTTGGTTAAATCACAGTGGTTGTACTCCCTTAATTGATATGTTTTCACAATCCAGTTCAGATCTTGTTGATATTCATCTTTCAACTGATGATACATTGACTGGTGATGACTCCTCGGTAGATATTTGTACACCAAATAATTTGGAGAAACTATGCCAAATTGGTGAAAAGTTATTGAAGAAACCAGTATCTAGGGTCAACTTAGAGAGTGGTATTTATGAGCCAGTGGAAAATAAGGGTAGCAATGAAGATGCTCTAACAAGGTGA 1113 0.3908 MERAKSSLLHLQPPTYGKLITILSIDGGGIRGIIPATILAFLESQLQELDGEDARLADYFDVITGTSTGGLVTAMLSTPNEEKRPLFAAKDIKPFYLEHGPNIFPQPKCLWGTTPGKFLKSLIGPKYNGKYLHGLIKERLRETRVHETLTNVVIPTFDIKTMQPTIFSSYKIKRFPYMNAQLSDICISTSAAPTYLPAYYFKNQYHIEKIHEFNLIDGGVYANNPTLVAVNEVIKQIVNDNPDFFPIKPLDYGRFVIISLGTGAPKNEQKFNANMAAKWGLLGWLNHSGCTPLIDMFSQSSSDLVDIHLSTDDTLTGDDSSVDICTPNNLEKLCQIGEKLLKKPVSRVNLESGIYEPVENKGSNEDALTR 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0186 370 PANTHER PATATIN 1 370 - -
Lal21g0186 370 CDD Pat17_isozyme_like 17 353 - -
Lal21g0186 370 PANTHER XYLOSE ISOMERASE 1 370 - -
Lal21g0186 370 Pfam Patatin-like phospholipase 23 229 IPR002641 GO:0006629
Lal21g0186 370 Gene3D Cytosolic phospholipase A2 catalytic domain 10 370 - -
Lal21g0186 370 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 230 IPR002641 GO:0006629
Lal21g0186 370 SUPERFAMILY FabD/lysophospholipase-like 19 356 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0186 Lal-Chr21 1240410 1242210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0186 11 370 Miscellaneous Gene Families AT2G26560 61.333 1.67e-159 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0186 - - gmx:100783909 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0186 21 1240410 1242210 Lal21g0186 21 1240410 1242210 ECH