Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0152 ATGGCTTCTTCATCTCCTCTCATCAGTGTCACCCCCGAATGGAACGATTTGAAGGCGCATGTGGACGAAATTAAAAACACTCATCTCCGTAATCTTTTGACCGATGATTCCAGATGCCAATCCATGCTTCTTGATTCGGATGGAATTGTTCTGGATTATTCAAGGCAACAAGCCACTCTTGAAACTATCCAAAAGCTCTTCCAATTGGCTCAGGCTGCATCACTCAAGGATAAGATAAATCGCATGTACGGTGGCGAGCGTATAAACAGCACCGAGAATAGGTCAGTGCTACACATAGCCCTCCGTGCTTCAAGGGACGCTGTTATAAACAGTGATGGGGAAAATGTTGTGCCTGAAGTTTGGAAAGTTCTTGACAAGATTAAGGACTTCTCTGACCGGGTTCGGAATGGATCTTGGGTTGGAGCTACAGGAAAACCTTTGAAGGACGTTGTTGCTGTCGGAATTGGTGGCAGCTTCTTAGGTCCACTGTTTGTACACACTGCACTTCAAACAGACCCTGAAGCCAAAGAATCTGCAAGTGGTCGTCAGCTGCGCTTTCTTGCAAATGTTGATCCGGTTGACGTTGCTAGAAATATCACAGGATTAAATCCTGAAACAACTCTAGTTGTGATTGTTTCAAAGACTTTTACAACAGCTGAAACCATGCTGAATGCTCGAACACTGAGAGAATGGATTTCATCTGCACTTGGGCCCTCTGCAGTTGCAAAACATATGGTGGCAGTCAGCACAAATCTCACGCTCGTGGAAAAGTTTGGTATTGATCCTAATAATGCTTTTGCCTTTTGGGACTGGGTTGGTGGTCGGTATAGTGTTTGCAGTGCAGTTGGAGTGTTACCATTATCTCTACAGTACGGTTTCCCAGGGGCTTCCAACATTGATCAACATTTCAATTCACAACCATTTGAAAGGAACATTCCTGTGCTTCTGGGTTTATTGAGTGTATGGAATGTTTCATTTCTTGGATATCCTGCCAGAGTTAGCATGGAAAGTAACGGCAAGGGTGTTTCAATTGATGGTCTTCCTCTACCATTTGAGACTGGTGAAATTGATTTTGGTGAGCCTGGAACTAATGGGCAGCATAGCTTTTATCAGCTTATACATCAGGGGCGTGTGATTCCTTGTGATTTTATTGGAGTTGTAAAAAGTCAGCAACCTGTCTTTCTGAAAGATGAAGTGGTCAGTAACCATGATGAGCTAATGTCCAACTTTTTTGCACAGCCTGATGCCCTTGCATATGGGAAGACAGCAGATCAGCTGCAAAAGGAGAATGTTTCTCCACATCTTATTCCTCACAAGACCTTCAGCGGCAATCGACCTTCTGTCAGCCTTCTGCTTCCATCATTGAATGCTTACAATATTGGGCAGCTATTGGCAATCTATGAGCACAGAATTGCTGTAGAGGGTTTCATTTGGGGCATCAATTCTTTTGATCAGTGGGGAGTAGAGTTGGGGAAGTCATTGGCTACTCAAGTCAGAAAGCAATTGCATGCATCTCGCACTAAAGAAGAACCAGTTCAGGGCTTTAATTTCAGTACTACAGCATTGTTGACAAGATATCTTCAGGCTTAG 1590 0.4384 MASSSPLISVTPEWNDLKAHVDEIKNTHLRNLLTDDSRCQSMLLDSDGIVLDYSRQQATLETIQKLFQLAQAASLKDKINRMYGGERINSTENRSVLHIALRASRDAVINSDGENVVPEVWKVLDKIKDFSDRVRNGSWVGATGKPLKDVVAVGIGGSFLGPLFVHTALQTDPEAKESASGRQLRFLANVDPVDVARNITGLNPETTLVVIVSKTFTTAETMLNARTLREWISSALGPSAVAKHMVAVSTNLTLVEKFGIDPNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFPGASNIDQHFNSQPFERNIPVLLGLLSVWNVSFLGYPARVSMESNGKGVSIDGLPLPFETGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGVVKSQQPVFLKDEVVSNHDELMSNFFAQPDALAYGKTADQLQKENVSPHLIPHKTFSGNRPSVSLLLPSLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHASRTKEEPVQGFNFSTTALLTRYLQA 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0152 529 CDD SIS_PGI_1 121 289 IPR035476 -
Lal21g0152 529 ProSitePatterns Phosphoglucose isomerase signature 2. 475 492 IPR018189 GO:0004347|GO:0006094|GO:0006096
Lal21g0152 529 CDD SIS_PGI_2 335 498 IPR035482 -
Lal21g0152 529 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 11 528 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lal21g0152 529 Gene3D - 13 484 - -
Lal21g0152 529 ProSiteProfiles Glucose-6-phosphate isomerase family profile. 11 529 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lal21g0152 529 ProSitePatterns Phosphoglucose isomerase signature 1. 270 283 IPR018189 GO:0004347|GO:0006094|GO:0006096
Lal21g0152 529 Gene3D - 485 529 IPR023096 GO:0004347|GO:0006096
Lal21g0152 529 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 11 528 - -
Lal21g0152 529 Hamap Glucose-6-phosphate isomerase [pgi]. 46 502 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lal21g0152 529 PRINTS Glucose-6-phosphate isomerase signature 150 169 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lal21g0152 529 PRINTS Glucose-6-phosphate isomerase signature 266 284 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lal21g0152 529 PRINTS Glucose-6-phosphate isomerase signature 443 461 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lal21g0152 529 PRINTS Glucose-6-phosphate isomerase signature 461 475 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lal21g0152 529 PRINTS Glucose-6-phosphate isomerase signature 475 488 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lal21g0152 529 Pfam Phosphoglucose isomerase 52 523 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lal21g0152 529 Gene3D - 98 293 - -
Lal21g0152 529 SUPERFAMILY SIS domain 11 528 IPR046348 GO:0097367|GO:1901135
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0152 Lal-Chr21 1028618 1037322 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0152 K01810 - gmx:100807719 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0152 21 1028618 1037322 Lal21g0152 21 1028618 1037322 ECH