Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0150 ATGACGGTGGAAGTGGAGTGTTGTGGAACAAAGTTTGCATTGTTCATAGTGATAATAATTGGATTGGTATGCTTTGCAGGACTAATGGCTGGTCTCACACTTGGTCTCATGTCTTTAGGACTCGTTGACCTCGAAGTTCTCATCAAATCTGGTCCTCCTCGGGATCGCATCCATGCTTCCAAAATTTTTCCGGTGGTTAAGAACCAACATCTTTTGCTTTGCACGCTTTTGATCGGAAACTCCTTGGCTATGGAGACTCTTCCCATTTTTCTTGATGCACTTGTGCCTTCCTGGGCTGCAATTTTGATTTCGGTCACCCTCATCCTCATGTTTGGAGAGATATTGCCGCAAGCGATCTGTACTCGATATGGATTGACAGTTGGAGCGACACTGGCCCCATTTGTTAATGTTCTTCTAGTAGTATTCTACCCCATCTCTTATCCAATCAGCAAGGTTCTTGATTGGATGTTGGGAAAAGGACATGCTGCCCTTTTAAAGAGAGCAGAGCTCAAAACATTTGTGAATTTTCATGGAAATGAGGCTGGTAAAGGAGGAGACTTAACACATGATGAGACAACCATCATAACTGGTGCACTTGAATTGACTGAAAAAACTGCAAAAGATGCCATGACTCCCATATCAAAGGCATTTTCCCTTGATCTGGATGCTACCCTAAACTTGGACACACTGAATACAATAATGACATTAGGTCATAGTAGAGTTCCAGTTTTTGCAGGAGAGCCAAGAAATATAATTGGACTTGTTCTGGTTAAAAATCTCTTTATGGTTGATTCAAAGGCTGCAGTTCCTCTAAGAAAAATGATCATCAGAAAAATTCCTCGTGTTTCAGAGAACATGCCTCTTTATGATATACTGAATGAATTTCAGAAGGGTCACAGCCATATTGCAGTTGTGTATAGGGATCTAAATGATAAAAAAGACACACCTAAAAGAGTTAAAGATCGAGAACGTTATGACTTTAAGGACAGCTGCAAGAACAAGGGAGAAAAGGCGCCCTTGGATAAAGGTGTTGAATCGGAGTCAGCTGATACTTTGACTACTATTGCTAAGGTCGATGGCAGTCCACAGGGGAAGAAGACTCCACCAGCTAATCCTGCTCCTGCCTTTAAGAAACGACATAGAGGTTGTTCACATTGCATCCTCGACGTTGATAATTCTCCCTTGCCTGTTTTTCCACCCAATGAAGTAGTTGTTGGTGTTATTACAATGGAGGATGTCATTGAAGAGCTTCTTCAGGAGGAGATATTAGATGAAACTGATGAATATGTCAATATCCATAACAAGATAAAAGTTAACATGAATGCTTCCAAGGAGAAGTCTCCTAATACAATTCCGGTTCAGCCTTCTCCTTTAGCAGTTCAAGGACAGACCCCAACTAATTCAGTTTCTACAGCTACTTCTGCAACAGGATCACCTACGACAATCGATCAAATCTCTGAAAACGATTCACTCAAGAATCAATAA 1485 0.4121 MTVEVECCGTKFALFIVIIIGLVCFAGLMAGLTLGLMSLGLVDLEVLIKSGPPRDRIHASKIFPVVKNQHLLLCTLLIGNSLAMETLPIFLDALVPSWAAILISVTLILMFGEILPQAICTRYGLTVGATLAPFVNVLLVVFYPISYPISKVLDWMLGKGHAALLKRAELKTFVNFHGNEAGKGGDLTHDETTIITGALELTEKTAKDAMTPISKAFSLDLDATLNLDTLNTIMTLGHSRVPVFAGEPRNIIGLVLVKNLFMVDSKAAVPLRKMIIRKIPRVSENMPLYDILNEFQKGHSHIAVVYRDLNDKKDTPKRVKDRERYDFKDSCKNKGEKAPLDKGVESESADTLTTIAKVDGSPQGKKTPPANPAPAFKKRHRGCSHCILDVDNSPLPVFPPNEVVVGVITMEDVIEELLQEEILDETDEYVNIHNKIKVNMNASKEKSPNTIPVQPSPLAVQGQTPTNSVSTATSATGSPTTIDQISENDSLKNQ 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0150 494 MobiDBLite consensus disorder prediction 330 349 - -
Lal21g0150 494 MobiDBLite consensus disorder prediction 330 344 - -
Lal21g0150 494 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 4 478 IPR045095 GO:0010960
Lal21g0150 494 SUPERFAMILY CBS-domain pair 196 308 IPR046342 -
Lal21g0150 494 MobiDBLite consensus disorder prediction 443 494 - -
Lal21g0150 494 MobiDBLite consensus disorder prediction 357 377 - -
Lal21g0150 494 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Lal21g0150 494 Gene3D - 189 322 IPR046342 -
Lal21g0150 494 Gene3D - 349 425 IPR046342 -
Lal21g0150 494 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Lal21g0150 494 Pfam Cyclin M transmembrane N-terminal domain 18 189 IPR002550 -
Lal21g0150 494 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE, EXPRESSED-RELATED 4 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0150 Lal-Chr21 1019318 1023619 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0150 K16302 - gmx:100804572 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0150 21 1019318 1023619 Lal21g0150 21 1019318 1023619 ECH