Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0145 ATGAAGCATTGTTGGTTCTTTCTAGTTTTCTTAGTTGGAACTGTGACACTAGACAGAGGGATCCATGTAGAAGCAGATGAAGGGTTTGTTAAAGCAAAAGGAGTGCAGCTTATGCTAAATGGAAGTCCCTACTATGCAAATGGTTTTAATGCATATTGGTTAATGTATATTGCTTCTGATACATCTCAGAGAAATAAAGTCACATCAACATTTCAAGAGGCTGCAAATCATGGCCTTAACATAGCTAGGACTTGGGCTTTCAGTGATGGTGGTTATAAACCCTTACAAAATTCACCTGGATCATACAATGAGGAAATGTTTAGGGGGTTGGACTTTGCAATAGCAGAAGCCAGAAAATATGGGATCAAACTAGTTTTGAGTTTGGTGAATAACTATGAGAGTTTAGGAGGAAAAAAACAGTATGTAGAGTGGGCAAGGAATCAGGGTCAGTACTCAATTAATTCTGAAGATGATTTCTTCACAAATCCTGTAGTCAAGGGATACTACAAAAACCACATCAAGAGTGTACTTACAAGACAGAATAGCCTTACGGGTGTTGCTTACAAAGATGAGCCAACTATAATGGCTTGGGAGCTAATGAATGAGATAAGGTGCCCTTCTGATCAATCAGGAAACACAGTTCAGGCTTGGATTACTGAAATGGCATCTTACTTGAAATCCATAGATGGAAACCACTTGCTAGAAGCTGGCCTAGAAGGTTTCTATGGGCAATCAAAGCAAGACTCTAATCCCAACTTCAGAGTAGGGACAGATTTCATTGCAAATAACCAAATCCCTGGCATTGATTTTGCAACAATTCACTCCTACCCTGACCAATGGCTAACAAGTTCAAGTTATGAAGACCAAATCTCATTCTTAGGCAAGTGGCTCAATGAGCACATCCAAGATGCACAGAACATCCTTCACAAGCCACTTCTATTCGCCGAGTTTGGGATTTCGACAAAAAACTTGGGTTCAAACTCGGCACCAAGGGACCGGTTTTTCAATACGGTCTACTCTGCAATATATTCATCTGCAAGTGGTGGGGGGGCTGCTGTTGGTGGCTTATTTTGGCAACTTTTAGCTGAAGGAATGGATTCTTTTCGCGATGGCTACGAGGTGGTTTTAGGCGAGAGTCCCTCAACAGATACTTTGATTGCTCAAAACTCTCAAAAGCTAATCCGAATTCGGAAGATGTATGCTAGACTGAGAAACATTAACAAGTGGAATAAAGCAAGAGAAAATAGAGAGTCTAATGAGGGTGTTGATGCCAGAAACTGA 1281 0.4075 MKHCWFFLVFLVGTVTLDRGIHVEADEGFVKAKGVQLMLNGSPYYANGFNAYWLMYIASDTSQRNKVTSTFQEAANHGLNIARTWAFSDGGYKPLQNSPGSYNEEMFRGLDFAIAEARKYGIKLVLSLVNNYESLGGKKQYVEWARNQGQYSINSEDDFFTNPVVKGYYKNHIKSVLTRQNSLTGVAYKDEPTIMAWELMNEIRCPSDQSGNTVQAWITEMASYLKSIDGNHLLEAGLEGFYGQSKQDSNPNFRVGTDFIANNQIPGIDFATIHSYPDQWLTSSSYEDQISFLGKWLNEHIQDAQNILHKPLLFAEFGISTKNLGSNSAPRDRFFNTVYSAIYSSASGGGAAVGGLFWQLLAEGMDSFRDGYEVVLGESPSTDTLIAQNSQKLIRIRKMYARLRNINKWNKARENRESNEGVDARN 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0145 426 SUPERFAMILY (Trans)glycosidases 29 382 IPR017853 -
Lal21g0145 426 Gene3D Glycosidases 25 397 - -
Lal21g0145 426 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 2 417 - -
Lal21g0145 426 Pfam Cellulase (glycosyl hydrolase family 5) 48 327 IPR001547 GO:0004553|GO:0071704
Lal21g0145 426 PANTHER - 2 417 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0145 Lal-Chr21 1000324 1003140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0145 7 413 Glycoside Hydrolase AT5G66460 63.171 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0145 K19355 - gmx:100794126 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0145 21 1000324 1003140 Lal21g0145 21 1000324 1003140 ECH