Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0138 ATGAACATGAACAACAATCACAAGCTTCTTCTATTAACCTTCATTATATGCCGTTCAATAGTAACATTTGGGTTAACGTTGTTCCCAACGGAGCTCCTCAGTTTAGGGCTTAAAGGTAAACTAAGCATGGAAGTAGAATCATCTTCGAAGGATTTCGGAATGTTAAACCAAGGAGAGGCTGTAGCGGTTCTACACCCAACAGGTTCGGCTGAAGATGTAGCTCGGCTTATCCGAACCGCGTATGAGTCAGGGTTCGCGGTTTCAGCAAGAGGACATGGACACTCAATAAATGGACAAGCAATGATAAAAGAGAAAAAGTTGAAAGGGGTGGTGATTGAAATGGGGAAAGGAGGTGATAATAATAATATTAGAGTATGTGAAGAAGAAATGTATGTAGATGTGTGGGGTGGTGAGTTATGGATAGAAGTGTTGAAGGCAACACTTGAGTATGGATTAGCACCTATGTCTTGGACTGATTACTTGTATTTATCTGTGGGTGGTACCCTTTCCAATGCTGGTATTAGTGGCCAGACCTTCAATCATGGTCCTCAAATCACCAATGTTCATCAGCTTGATGTAGTTACAGGTAAGGGTGAGTTGTTGACATGTTCAGAAGAGCAGAACTCAGAGTTGTTCCATGGTGTACTTGGTGGTCTAGGACAGTTTGGAGTCATCACAAGGGTCAGAATGCCTCTCCAACCAGCTCCTCACAGAGTTCGTTGGATACGAGTGTTGTACTCCAATTTTTCAACCTTTACTAAGGATCAAGAGTTTCTCATCTCTCTGCATGAGAAACCAGCGAACCAAAAATTTGACTATGTTGAGGGTTTTGTGATAGTGGATGAAGGGCTTATCAATAATTGGAGATCTTCGTTCTTTTCAGCTAGTAACCCAGTTCAATTTATTTCTCTAAATGTCGATGGTGGTGCTTTATACTGCTTGGAGATTACCAAAAATTACAACCAACAAAACGCAGACTCCGTTGATGAGGAAATAAGGGTTCTGTTAAAAAAGCTAGATTTTATACCAACATCGGTGTTCACAACGGACCTGCCTTATGTAGATTTTCTGGATCGTGTACATAAGGCAGAGCTAAAGCTTAGGTCCAAGGGTTTATGGGACATACCTCATCCATGGCTCAACCTTTTTGTTCCAAAATCAAGGATAGATGACTTCGACAAGGGTGTATTTAAGGGAATTTTGGGAAATAATACAAGTGGGCCTATCCTCATCTACCCTATGAATAAAAGCAAGTGGGACCAACGGAGTTCGGTGGTGACGCCAGAGGAGGAAGTGTTTTACCTGGTGGCATTTCTGAGATCAGCTTTGGATGGTGAAACATTAGAGTACCTGAGTAATCAGAACCATCAGATTCTGAAATTCTGCCATGATGCGAAGATCAAGGTGAAACAGTACCTGCCCCATTACACAACACAACAAGAGTGGATGGACCACTTTGGAGATAAGTGGACCCAATTCTTTCACAGAAAGATGCAATTTGACCCTCGCTGCATCTTAGCCACTGGCCAACAAATATTTGAATTTGACCCTTCTATAGCAACAAACATCACCAAGTACCATGATATAATTTAG 1593 0.4175 MNMNNNHKLLLLTFIICRSIVTFGLTLFPTELLSLGLKGKLSMEVESSSKDFGMLNQGEAVAVLHPTGSAEDVARLIRTAYESGFAVSARGHGHSINGQAMIKEKKLKGVVIEMGKGGDNNNIRVCEEEMYVDVWGGELWIEVLKATLEYGLAPMSWTDYLYLSVGGTLSNAGISGQTFNHGPQITNVHQLDVVTGKGELLTCSEEQNSELFHGVLGGLGQFGVITRVRMPLQPAPHRVRWIRVLYSNFSTFTKDQEFLISLHEKPANQKFDYVEGFVIVDEGLINNWRSSFFSASNPVQFISLNVDGGALYCLEITKNYNQQNADSVDEEIRVLLKKLDFIPTSVFTTDLPYVDFLDRVHKAELKLRSKGLWDIPHPWLNLFVPKSRIDDFDKGVFKGILGNNTSGPILIYPMNKSKWDQRSSVVTPEEEVFYLVAFLRSALDGETLEYLSNQNHQILKFCHDAKIKVKQYLPHYTTQQEWMDHFGDKWTQFFHRKMQFDPRCILATGQQIFEFDPSIATNITKYHDII 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0138 530 Pfam FAD binding domain 68 204 IPR006094 GO:0050660
Lal21g0138 530 PANTHER CYTOKININ OXIDASE 5-RELATED 10 514 - -
Lal21g0138 530 Gene3D - 44 513 IPR016167 -
Lal21g0138 530 SUPERFAMILY FAD-linked oxidases, C-terminal domain 236 513 IPR016164 GO:0003824|GO:0050660
Lal21g0138 530 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 236 513 IPR015345 GO:0009690|GO:0019139|GO:0050660
Lal21g0138 530 ProSiteProfiles PCMH-type FAD-binding domain profile. 56 235 IPR016166 GO:0071949
Lal21g0138 530 PANTHER GULONOLACTONE OXIDASE 10 514 - -
Lal21g0138 530 SUPERFAMILY FAD-binding/transporter-associated domain-like 46 234 IPR036318 GO:0050660
Lal21g0138 530 Gene3D - 238 472 IPR016170 -
Lal21g0138 530 Gene3D - 114 237 IPR016169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0138 Lal-Chr21 956726 963964 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0138 K00279 - gmx:100790584 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0138 21 956726 963964 Lal21g0138 21 956726 963964 ECH