Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0134 ATGGACCTCGATCCTCGTCAATACGAAAACATTGCTGTAAATGATAATGACGTCCACAACGTTGTTCTGTCATATCTTATACATAACTGCTACAATGAGTCAGTAGAGTCATTCATTGCGTGCACTGGGATGAAGCAGCAAACAGATTATTTGGAGAACATGGAGAAAAGAAAAAGAATCTTTCAGTGTGCACTAGAGGGAAATGCACTTATGGCTATTGAGCTTGCTGAACAGCTGGGTCCGGATATTCTGAAGAACAATAAGGATTTGGAGTTTGATCTTCTGAGCCTTCATTTCGTTGATCTTGTTTGCTCTAAGAAATGCACAGAAGCTTTGGAATTTGCACAGATAAAGTTGAGCCCTTTTGGAAAGGAGCAAAAGTATATGGAAAAGCTTCAAGACTTTATGGCCCTTCTTGCTTATAACGAACCAGAGAAATCCCCAGTGTTTCATCTGCTTAGCTTAGAGTACCGGCAACAGGTTGCAGATAGTTTGAATCGGGCTATTCTTGGTTGCACACTTGAATCTTCCCAGCTACGCGGCAATGGAAAGGCTAATACAGCAGGCTACAGTCGTCAGACAATGTTTGACTCAGGAGACTGTCAAGGATGGACCTCCACCATTTTCCTTGAAGGATTTTCTCAAAAGTTGATGGGAAACAATCAAATATCCACAGGCAGTTGGGGAATGAAGCATGTTTAA 702 0.4174 MDLDPRQYENIAVNDNDVHNVVLSYLIHNCYNESVESFIACTGMKQQTDYLENMEKRKRIFQCALEGNALMAIELAEQLGPDILKNNKDLEFDLLSLHFVDLVCSKKCTEALEFAQIKLSPFGKEQKYMEKLQDFMALLAYNEPEKSPVFHLLSLEYRQQVADSLNRAILGCTLESSQLRGNGKANTAGYSRQTMFDSGDCQGWTSTIFLEGFSQKLMGNNQISTGSWGMKHV 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0134 233 Pfam CTLH/CRA C-terminal to LisH motif domain 54 171 IPR024964 -
Lal21g0134 233 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 53 110 IPR006595 -
Lal21g0134 233 ProSiteProfiles LIS1 homology (LisH) motif profile. 14 46 IPR006594 GO:0005515
Lal21g0134 233 SMART toby_final6 106 185 IPR013144 -
Lal21g0134 233 PANTHER RAN BINDING PROTEIN 9-RELATED 8 171 - -
Lal21g0134 233 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 30 8 171 - -
Lal21g0134 233 SMART ctlh 53 110 IPR006595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0134 Lal-Chr21 934339 938458 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0134 K23338 - gmx:100801338 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0134 21 934339 938458 Lal21g0134 21 934339 938458 ECH
Lal21g0134 21 934339 938458 Lal4g0088 4 535582 538842 LSH