Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0131 ATGGAGGAAGAGAATGGGAGTTCAAACTTGGAAACATCAAAAGCAGAGAGATCGGTGTGGCTGATGAAGTGTCCAGTGGTGGTGGCGAAGTCATGGAAACAAAATCATAATAATCAACATCATTCTCAACCACCTCTTGCTAAGGTTGTATTTTCCCTTGATCCTCTCCAACCTGATGATCCCTCTGCTCTTCAGTTTACGATGGAGATGTCCGGCTCTGAAGGTGTGAATATGCCAAAATCGTATGCTTTGAATATGTTTAAAGACTTCGTTCCTATGGGTGTGTTCTCTGAGGCAAACCAAGGCGGCAAGGTTGCAATGGAAGGGAAAGTAGAACATAAGTTTGATATGAAGCCCCATGGTGAAGACATTGAAGAGTATGGCAAATTGTGTCGTGAGAGAACAAACAAATCTATGATTAAAAATAGACAGATACAGGTTATTGACAATGATCGTGGAGTTCTAATGAGGCCAATGCCTGGGATGGTTGGTCTAATTTCATCCAATTCAAAGGATAAGAAGAGAACACAGCCAGTTAAACAAACTGATACGAAGAGAACAAGAAGAGACCGTGGAGAGCTGGAGGATATAATGTTCAAGCTATTTGAAAGACAGCCTAATTGGGCCTTGAAGCAGCTTGTTCAAGAGACTGATCAACCTGCACAATTCTTGAAAGAGATACTGAATGAACTGTGTGTATACAATAAAAGAGGTGCCAATCAAGGAACTTACGAGCTGAAACCTGAATACAAGAAATCTGTTGATGATACAGGTGCTGAATAA 783 0.4112 MEEENGSSNLETSKAERSVWLMKCPVVVAKSWKQNHNNQHHSQPPLAKVVFSLDPLQPDDPSALQFTMEMSGSEGVNMPKSYALNMFKDFVPMGVFSEANQGGKVAMEGKVEHKFDMKPHGEDIEEYGKLCRERTNKSMIKNRQIQVIDNDRGVLMRPMPGMVGLISSNSKDKKRTQPVKQTDTKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYKKSVDDTGAE 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0131 260 SUPERFAMILY Rap30/74 interaction domains 5 120 IPR011039 GO:0006367
Lal21g0131 260 MobiDBLite consensus disorder prediction 165 190 - -
Lal21g0131 260 Gene3D - 186 253 IPR036388 -
Lal21g0131 260 PANTHER GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2 3 257 IPR003196 GO:0005674|GO:0006366|GO:0006367
Lal21g0131 260 PANTHER TRANSCRIPTION INITIATION FACTOR IIF, BETA SUBUNIT 3 257 - -
Lal21g0131 260 MobiDBLite consensus disorder prediction 173 190 - -
Lal21g0131 260 CDD TFIIF_beta 9 119 - -
Lal21g0131 260 SUPERFAMILY "Winged helix" DNA-binding domain 186 252 IPR036390 -
Lal21g0131 260 Pfam TFIIF, beta subunit HTH domain 188 251 IPR040450 -
Lal21g0131 260 Pfam TFIIF, beta subunit N-terminus 16 136 IPR040504 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0131 Lal-Chr21 910907 914858 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0131 K03139 - gmx:100788473 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0131 21 910907 914858 Lal21g0131 21 910907 914858 ECH