Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0127 ATGGGTGCGCTTGCTACCTTCACTCATTGGTCTCCCGAGGACGATCTTCTTCTCAAAAACGCTGTTGAGGCAGGTGCTTCCTTAGAGTCACTTGCTAAAGGTGCAGTGCAGTTTTCTCGAAGATATAGTATTAGAGAAATACAAGATCGGTGGTATTCTATACTCTATGATCCTATTGTTTCTGAAGAAGCGGCTGCTGGTATGGCAAACTTTGAGCTTTCTACTTCACCTCTTCCATCAAAATTCTATAAGTTTGGACAGTCTAAAGAACGCAAAATTGTTTCTGTTAAGAGAAAAGCAGAAAGTGTCCGCACTTGTTATTATGCTATGCGTAAAAGAATCTGCAATAACACATTTACTCCCATGGACTTAAGTTTTCTAGTTGATCCAGAAAATGACAATTACATAATGAATGAAATTGAACCTTTTCCTGAAAATTGCATGCCTGAAGATGCTTCTTTGAATCATTTTGAAAGTCTTGATGTTGTCCGCTATGATTTTCCTGAAAATACAATGGATGGTGGTACTGCACCTAATGGAGTTACTTCCTGTACGTTTTACAATGGAGTTGAGCAAACAAATGAAGTTCAAGAAAAGCCTAATATTCTCAGAGACAATGGATCTTTGAATGGAGCAGTTGAGGAATTGGCTATAGATAGCTTGATTGGAGATGATAATTTAGAGGCAATGCCTTTGTCTACATTTGATGATATCAACACTGGCCCTGGAAATTTGTGTTCCGAGTTTGATGGAAATCATGTATTTGATTCTCCTGAGTTGGAGTGTGGAACATCATTTGATGTCTTACAGTTATCTCCACTTCCAGAAATGCCAATGTGGGCAACGGATAAGAGTTTTCCAAAACCTGATATGCCATGTGATGATTTTGAAGATTCTGTTACTTGCAGGGATGATTATCTGGCTGAATTATCAAATTCTCTATTGAACTTCACTAATGAGGAAGAGTTCTATCTGATGGATGTTGATGGAAAAGATGGGATTGATAAGTCTTATTACGACGGCCTGAGTTCTCTTTTATTAAATTCTCCCAATGATGTTCCTGATCAGATACCTATAAAGGCTGAAACAGAGTTGTTAGTAGCCTCCCATCCACATGTTTCAAATCTTTCAGTTTCATGTCACCCGAAAGCTGATGATATGATGGGGTCGCACTCTAGTGATGGGCAAGTAGCTCACAAATTACAGCCCCAAATGCCATCTTCTGCCCCAGTTAGAGACCCTCGATTTCCTGAACTAATCAATGGAGTTATTTGCTGTATGTTAAGCATTGAAGACCCAGAAGTTCCGTCCAATGATGATGTTTTCCTGCCCTTCGATGTGCCCCCTTCGAATTTTTCCTCTGCTTCTAAATGGACTCCTAAAGAATCCAATAAACCACCTTCATCATCTGTTATGGATTGTGGATTTAGTAACCATAGAGCTAATGGAAGAGGTAAAGTTTTGAAGCAGGTAGAACAAAAAAACCCCAGAGAATATCACGCATCTTCTCTGAACATGGGATCTCCTCCCTTGCCAATATCAGTTGGTGTTTCTAATGTAAAATGTGAGTTTCCCAATAGTCATTTATCACACACAGTGGCTAGGTGTGCAGTTACTGTTTCTGGTAGCGCAGGCGTAAATAATTCAGCAAACACAACTAGGGAGAAACCAGTCCCTGGTTCTAATGACTTCAGAAATCATCCTCAACCTAATGGCTCTAGCATTAAACAGGAACTAGCTGTTGCCTTGCCAATTCAAGATTATCAATTGCAACATACTGAAATGAGATCCTCAAATGCTCTTGAGTCAGAGCTTCTGGCAAATCCTCCAACATTAGATGTTGAAGAGCATTACTTTGAGAGCGATGACGATGTTCCTTATTTTTCTGACGTAGAGGCAATGATACTTGATATGGACTTGGATCCTGATGATCAGGATTTGTATTACAATGAAGAAGTATTGAGATATCAACATGAGGAAACTAAGCGAACCATCGCAAGGCTGGAACAGGGTGCTCATTCTCATATGCAAAGGATCATTGCTTCACATGGAGCATTTGCCATTTTATATGGTCGCCGCTCGAAACATTATATTAAGAAAGCCGAGGTTGTAATTGGACGGGCAACGGAAAGTGTTCCTGTAGACATTGACTTGGGCAAAGAAGGATATGCTAATAAAATATCTAGGCGCCAGGCTGTTATAAAGATGGATAAGGATGGATTTTTCTACATTAAAAACTTCGGCAAGGGTTCAATCTTGGTAAATAGCAAAGAAGTGCACAACAGTCAGTCTCAAAGACTACATTCCAATTGTCTGATTGAGTTGAGAGGCTTGCCATTCATATTTGAGACAAATCAGAGTCGTGTGAAGGAGTACCTGAATCATCATCAACATATTACTGACAATTCCTAA 2412 0.3968 MGALATFTHWSPEDDLLLKNAVEAGASLESLAKGAVQFSRRYSIREIQDRWYSILYDPIVSEEAAAGMANFELSTSPLPSKFYKFGQSKERKIVSVKRKAESVRTCYYAMRKRICNNTFTPMDLSFLVDPENDNYIMNEIEPFPENCMPEDASLNHFESLDVVRYDFPENTMDGGTAPNGVTSCTFYNGVEQTNEVQEKPNILRDNGSLNGAVEELAIDSLIGDDNLEAMPLSTFDDINTGPGNLCSEFDGNHVFDSPELECGTSFDVLQLSPLPEMPMWATDKSFPKPDMPCDDFEDSVTCRDDYLAELSNSLLNFTNEEEFYLMDVDGKDGIDKSYYDGLSSLLLNSPNDVPDQIPIKAETELLVASHPHVSNLSVSCHPKADDMMGSHSSDGQVAHKLQPQMPSSAPVRDPRFPELINGVICCMLSIEDPEVPSNDDVFLPFDVPPSNFSSASKWTPKESNKPPSSSVMDCGFSNHRANGRGKVLKQVEQKNPREYHASSLNMGSPPLPISVGVSNVKCEFPNSHLSHTVARCAVTVSGSAGVNNSANTTREKPVPGSNDFRNHPQPNGSSIKQELAVALPIQDYQLQHTEMRSSNALESELLANPPTLDVEEHYFESDDDVPYFSDVEAMILDMDLDPDDQDLYYNEEVLRYQHEETKRTIARLEQGAHSHMQRIIASHGAFAILYGRRSKHYIKKAEVVIGRATESVPVDIDLGKEGYANKISRRQAVIKMDKDGFFYIKNFGKGSILVNSKEVHNSQSQRLHSNCLIELRGLPFIFETNQSRVKEYLNHHQHITDNS 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0127 803 Pfam N-terminal region of micro-spherule protein 10 96 IPR025999 -
Lal21g0127 803 SUPERFAMILY SMAD/FHA domain 685 783 IPR008984 GO:0005515
Lal21g0127 803 MobiDBLite consensus disorder prediction 544 570 - -
Lal21g0127 803 PANTHER FHA DOMAIN PROTEIN 1 798 - -
Lal21g0127 803 CDD FHA 691 784 IPR000253 GO:0005515
Lal21g0127 803 Gene3D - 653 797 - -
Lal21g0127 803 PANTHER MICROSPHERULE PROTEIN 1 1 798 IPR037912 GO:0002151|GO:0031011|GO:0071339
Lal21g0127 803 ProSiteProfiles Forkhead-associated (FHA) domain profile. 703 759 IPR000253 GO:0005515
Lal21g0127 803 Pfam FHA domain 703 775 IPR000253 GO:0005515
Lal21g0127 803 SMART FHA_2 702 759 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0127 Lal-Chr21 877490 884155 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0127 - - lang:109343962 1507.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0127 21 877490 884155 Lal21g0127 21 877490 884155 ECH