Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0117 ATCAACAACCCATCAAGGTATCAAGGTTTAGACGCATATGTGTCTACTGTGGTAGCAGCACTGGTGGAGAGGAACATTGACTTGGTATATGGAGGAGGAAGCATTGGGTTGATGGGTCTAATCTCACAAGTTGTCTATGATGGTGGACGCCACGTGTTAGGAGTGATTCCCAAAACACTTAATTCAAAAGAGATAACAGGAGAAAGTGTAGGAGAAGTAAGAGCTGTATCGGGCATGCACCAACGTAAGGCTGAAATGGCTCGACAAGCTGATGCATTTATAGCCTTACCAGGTGGATACGGCACCCTCGAAGAACTATTGGAAATCATAACCTGGGCACAACTAGGAATCCATGATAAACCGGTGGGGTTGTTGAATGTGGATGGGTATTACAACTCGTTGCTGGCATTCATGGACAAAACTGTGGATGAAGGTTTTGTAACACCAGCTGCCCGTCACATTATTGTCTCTGCCCACACTGCCCAAGATCTCATGTCCAAGCTTGAGGAATATGTCCCCATGCACTATGGCGTGGCCCCCAAGCTAAGTTGGGAGATGGAGCAACAACTAGTTAACACTGCAAAGTTGGATATTTCTCGTTGA 603 0.461 INNPSRYQGLDAYVSTVVAALVERNIDLVYGGGSIGLMGLISQVVYDGGRHVLGVIPKTLNSKEITGESVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHDKPVGLLNVDGYYNSLLAFMDKTVDEGFVTPAARHIIVSAHTAQDLMSKLEEYVPMHYGVAPKLSWEMEQQLVNTAKLDISR 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0117 200 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 19 189 - -
Lal21g0117 200 Pfam Possible lysine decarboxylase 38 167 IPR031100 -
Lal21g0117 200 Gene3D - 3 170 - -
Lal21g0117 200 SUPERFAMILY MCP/YpsA-like 14 171 - -
Lal21g0117 200 PANTHER LOG FAMILY PROTEIN YJL055W 19 189 - -
Lal21g0117 200 TIGRFAM TIGR00730: TIGR00730 family protein 15 171 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0117 Lal-Chr21 794680 798088 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0117 K22522 - gmx:100782787 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0117 21 794680 798088 Lal21g0117 21 794680 798088 ECH