Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0113 ATGAAAGGAACGAAGAGGTCAATCTACGCCGTCACAACATGGGTTCACCGGCAACCACCCAAGTTGAAGGGCTTTCTCGCCTTGGTTATTGGGATTACAGCGTTGCTTTTCATCAGAATGGTGGTTCACGACCACGACAACCTCTTCGTCGCTGCTGAGGCTGTTCATGCATTAGGAATCACTGTCCTCATTTTCAAGCTCTCCAAGGATAAAACTTGTTCTGGACTTTCACTTAAATCACAGGAACTGACAGCATCGTTTTTAGCTGTTAGACTTTACTGCAGTTTTGTCATGGAATACGATATACACACCATACTTGATTTGGCAACATTGGGGACGACCCTTTGGGTTATTTATATGATACGCATCAAACTGATAGCCAGTTATATGGATGATAAGGACAACCTTGCCATATACTACGTGGTGGTACCTTGTGCTGCGCTGTCCTTGCTTATTCATCCAACAACTCGACATCAAATTGTTAACAGGATTCTCTGGGCCTTTTGTGTTTATCTTGAAGCTGTATCTGTTCTTCCTCAGCTGCGAGTCATGCAGAATGCTAAGATTGTTGAACCATTTACAGCACATTATGTTTTTGCCCTTGGAGTTGCAAGGTTCTTGAGTTGTGCACATTGGGTCCTCCAGGTAATAGATACTCGTGGACGCCTACTAACGGCTTTGGGTTATGGATTGTGGCCTTCTATGGTACTTCTATCAGAAATTGTCCAAACTTTCATCCTAGCAGATTTTTGCTACTACTACGTCAAGAGCATTGTTGGCGGACAACTTGTTCTTCGGCTTCCTTCAGGAGTGGTGTAA 819 0.4383 MKGTKRSIYAVTTWVHRQPPKLKGFLALVIGITALLFIRMVVHDHDNLFVAAEAVHALGITVLIFKLSKDKTCSGLSLKSQELTASFLAVRLYCSFVMEYDIHTILDLATLGTTLWVIYMIRIKLIASYMDDKDNLAIYYVVVPCAALSLLIHPTTRHQIVNRILWAFCVYLEAVSVLPQLRVMQNAKIVEPFTAHYVFALGVARFLSCAHWVLQVIDTRGRLLTALGYGLWPSMVLLSEIVQTFILADFCYYYVKSIVGGQLVLRLPSGVV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0113 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal21g0113 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal21g0113 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal21g0113 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal21g0113 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal21g0113 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal21g0113 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lal21g0113 272 PANTHER LUMEN PROTEIN RETAINING RECEPTOR, PUTATIVE-RELATED 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0113 Lal-Chr21 776410 780699 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0113 4 272 Miscellaneous Gene Families AT4G38790 80.669 7.72e-166 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0113 - K10949 gmx:100787747 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0113 21 776410 780699 Lal21g0113 21 776410 780699 ECH