Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0080 ATGAGCAGGAGTTTGGGAATACCAGTGAAGCTACTCCATGAGGCATCGGGTCATGTGGTGACGGTGGAGCTTAAGAGTGGAGAGCTCTACAGAGGCAGCATGATCGAGTGCGAGGACAACTGGAACTGTCAACTTGAGAGCATCACCTACACTGCAAAGGATGGAAAAACATCACAACTTGAGCATGTATTCATTCGAGGGAGCAAAGTTTATGGTAATCCCTGA 225 0.48 MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGSKVYGNP 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0080 74 Gene3D - 3 71 - -
Lal21g0080 74 CDD Sm_D3 8 70 IPR034099 GO:0000387|GO:0005681
Lal21g0080 74 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SMD3A 1 70 - -
Lal21g0080 74 SUPERFAMILY Sm-like ribonucleoproteins 7 71 IPR010920 -
Lal21g0080 74 SMART Sm3 10 73 IPR001163 -
Lal21g0080 74 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 70 IPR027141 GO:0006396
Lal21g0080 74 Pfam LSM domain 11 70 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0080 Lal-Chr21 566678 569707 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0080 K11088 - gmx:100305856 144.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0080 21 566678 569707 Lal21g0080 21 566678 569707 ECH