Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0072 ATGGATCAGTTCGATGCGTATTTCAGAAGAGCAGATTTAGACGGAGATGGCAGAATCAGTGGCTCTGAAGCTGTTTCTTTCTTTCAGGGATCCAATTTGCCTAAACACGTTCTTGCTCAGATATGGATGCATGCTGATAATGCCAAAACTGGTTTCCTTGGTCGGAATGAATTTTATAATGCTCTTAGATTAGTAACTGTTGCTCAGAGTAAGCGAGATTTAACGCCTGATATTGTCAAGGCAGCGTTATATGGTCCGGCTGCTGCCAAAATCCCTCCACCACAGATCAATCTTGCCGCTATACCTCCGCTTCAAGGGAATCGGCCGGCTACGGTTCCTGCTCCTGTTCCGCAGATGGGTTTAAGTACTGCACCGATGCAGTCTCAAAATTTTCCCTATAGAGGACAGCAAGGATTATCAGGTCCTGTTCCAAACCCACAGTATTTTCCTTCGCAGCAGAGTACCAGCATGAGACCCCCTCAACAATCCATGCCTACACCTCAGCCTGTACCTACTAGTAGCGCTCCCCGCCCACAACAAACTTTCTCAAATCCTGGCCTTTCAAGTGATTGGTATAGTGGAAGGCCCGGTATGGTTGCTACTAGGCCCGACATGGTTGCTACTAGGTCCGGTATGGTTGCTACCAGGCCCGATATGGTTGCTACCAGGCCTGGTATGGTTGCTACCAGGCCCGGTATGGTTGCTACCAGGCCTGGAGGAATCGCCCCATCAAGTCCGTTGTCAACATCAACAGCACTGTCTCCAGTCTCACCAATGCCCCAGCCAACAACTACTGTTAACACTAAAGCATTAGCTGTTTCTGGAAATGTGCTCTCCCCCAATTCAGCTTTGGGCAATGATTTTTTCTCTGCTGCCTCTTCCACACCAATAAAAGAACCTGCTGGACAGAATTTTTCTTTTAGCGTTGGTCCTTCCTCATCAGCCATTGTTCCAGTTTCCAGTGTTGCTCAACCGAAGCAAAATCCGCTCGATTCATTGCAGAGTTCATTCTCGATGCAGCCTGTAAATAGTCAGTTTCAGCAGACACAGCCTGTAAATAGCCAGTTTCAGCAGACACAGCCTGCAACAAACAGAAGCAACACAAGCCAGCAGATTTCCCCGCCAGCTTCTTCTCCACATGCATCATCTGGGATATCAGTTGGACTTGGGAATACTAGTTCTGATAATTCACAGCTTTCTTGGCCAAAAATGAAACCTGCTGATGTGCAGAAGTACGCAAAGGTGTTTATGGAAGTTGACACTGACAAGGATGGAAGAATCACTGGGGAGCAGGCACGCAGTCTATTTTTAAGTTGGAGATTACCAATAGATGTCTTAAAGAAGGTGTGGGACTTATCAGATCAGGATAATGATAGCATGCTTTCTTTGAAGGAGTTTTGCTTTGCTCTTTATTTAATGGAGCGGCACAGGGAAGGTCGACCTCTTCCACAATCTCTTCCAAATAATGTTTTATTTGATGGGACACTGCTGTCTATGATGGGTCATCCAAAACCTACTTATGGAAATGCAGCCTTGGGTGTGGGCCCAGGTTTTCATTCGCAACAAGGGATGCCAGGTGCTCGGCCAGTGGCACCAGAAGCTGGTCTGAGGCCCCCAGTGCAAGGAACTTCTACCCCAGCCCCTGGTATTATGCAGGCCAATCAGCAGAAGTCAGGTGCACCAGTTCTGGAGGATTCCTTTTTGAATCCCACAGATAATGGTGATCAGGATATATTAAACTCAAACTCTCAAGAAGCAGCAACAGCTGGGAAAAAGGTTAAAGAAACAGAGAATGTGATTCTGGATTCAAGAGAGAAGATTGTATTCTACCGCGACAAAATGCAGGAACTGGTTCTATATAAAAGCAGGTGTGATAATCGACTGAATGAGATTACAGAAAGGGCATCTGCAGATAAGCGGGAGGCAGAGACATTGGGCAAAAAGTATGAAGAGAAATACAAACAAGTAGCAGAAATAGCATCCAAATTGACCGTAGAAGAAGCTAAATTTCGTGACATACAGGAAAGGAAATCGGAGTTGCAGCAAGCCATTGTCAAAATGGTACAAGGAGGTAGTGCTGATGGTATTCTTCAGGTCCGTGCTGAACGCATACAGTCAGATCTTGATGGTTTATTTAATGCTCTATCTGAACGATGCAAGAAGCATGGGATAGATGTGAAGTCAATTACAATGGTTCAGCTTCCTACTGGGTGGCAACCAGGAATTGTGGATGATGCAGCTCTTTGGGATGAAGATTGGGATAAATTTGAAGATGAAGGATTTGCCAATGATCTCACATTTGATATGAAAAGTGCATCTTCAAAACCAAAACCTGCAATCATTCATGGAGATCAAAGTTTCCCTGATGACCATTCAGTTGGTTCGCCTGTGAAGGCAAATGGAAAGCATGAAAATTCTACCAATGGTGATTATACAGTTGAGGATGAATCTTCTTATGCACACAGTGAAGATGACTTGGGAAGAAGCCCCCATGATAGTCCAGCTGGAAAGACTACTGTAGAGAGTCCTGAAGGATTTTCAAATGATCATTTTAGAAAAAGTATTGAAGCAGATGCAGAAACAAATAGAAGCTTTGATGAATCAACCTGGGGTGCATTTGACAATAACGATGATGTGGATTCGGTGTGGGGTTTTAACCCTACCAAGGACTCTGATCTGGACCACCAGAGAGATTTCTTTACATCTGGTGATGATTTTGGTATAAACCCAATTAGAACAGGATCTACACATACAGATGGCACCTTCCAGTCTAAGAGCGCATTTACTTTTGATGATTCAGTGCCTGCAACTCCAGCTTCCAAGTTTGGTAACTCTCCAAGGTACAGTGAGGCAGGGGACTTCTTTGACATGTCGTCAAGGTTTGATTCCTTCAGCATGCATGAAAGTGGATATTCTCCCAAAGCAGAACCGAGGTTTACAAGATTTGATTCCATCAGCAGCAGCAAGGATTTCAGCTACAATCCTGCGAGTCTCTCAAGGTTTGATTCCATAAGTAGCAGCAAAGATTTTGGCTACAATCCTGGGACTTTCACAAGGTTTGATTCAATCAGTAGCAGCAAAGATTTCGGTTTTGGTCGTGAGGCGGGACATGCCAGGTTTGACTCGATTAGTAGCACTAAAGACTTCGGTCACAGTGATGCGTTCTCTTTTGATGACACTGATCCATTTGGCTCCTCTGGCCCATTTAAGGTCTCTTCAGAGAGTCACTCTCCGAAGAAAAACTCTGATGGTTGGAGTGCTTTCTAG 3267 0.449 MDQFDAYFRRADLDGDGRISGSEAVSFFQGSNLPKHVLAQIWMHADNAKTGFLGRNEFYNALRLVTVAQSKRDLTPDIVKAALYGPAAAKIPPPQINLAAIPPLQGNRPATVPAPVPQMGLSTAPMQSQNFPYRGQQGLSGPVPNPQYFPSQQSTSMRPPQQSMPTPQPVPTSSAPRPQQTFSNPGLSSDWYSGRPGMVATRPDMVATRSGMVATRPDMVATRPGMVATRPGMVATRPGGIAPSSPLSTSTALSPVSPMPQPTTTVNTKALAVSGNVLSPNSALGNDFFSAASSTPIKEPAGQNFSFSVGPSSSAIVPVSSVAQPKQNPLDSLQSSFSMQPVNSQFQQTQPVNSQFQQTQPATNRSNTSQQISPPASSPHASSGISVGLGNTSSDNSQLSWPKMKPADVQKYAKVFMEVDTDKDGRITGEQARSLFLSWRLPIDVLKKVWDLSDQDNDSMLSLKEFCFALYLMERHREGRPLPQSLPNNVLFDGTLLSMMGHPKPTYGNAALGVGPGFHSQQGMPGARPVAPEAGLRPPVQGTSTPAPGIMQANQQKSGAPVLEDSFLNPTDNGDQDILNSNSQEAATAGKKVKETENVILDSREKIVFYRDKMQELVLYKSRCDNRLNEITERASADKREAETLGKKYEEKYKQVAEIASKLTVEEAKFRDIQERKSELQQAIVKMVQGGSADGILQVRAERIQSDLDGLFNALSERCKKHGIDVKSITMVQLPTGWQPGIVDDAALWDEDWDKFEDEGFANDLTFDMKSASSKPKPAIIHGDQSFPDDHSVGSPVKANGKHENSTNGDYTVEDESSYAHSEDDLGRSPHDSPAGKTTVESPEGFSNDHFRKSIEADAETNRSFDESTWGAFDNNDDVDSVWGFNPTKDSDLDHQRDFFTSGDDFGINPIRTGSTHTDGTFQSKSAFTFDDSVPATPASKFGNSPRYSEAGDFFDMSSRFDSFSMHESGYSPKAEPRFTRFDSISSSKDFSYNPASLSRFDSISSSKDFGYNPGTFTRFDSISSSKDFGFGREAGHARFDSISSTKDFGHSDAFSFDDTDPFGSSGPFKVSSESHSPKKNSDGWSAF 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0072 1088 SUPERFAMILY EF-hand 398 490 IPR011992 -
Lal21g0072 1088 Pfam Cytoskeletal-regulatory complex EF hand 402 488 IPR000261 GO:0005515
Lal21g0072 1088 CDD EH 412 478 IPR000261 GO:0005515
Lal21g0072 1088 ProSiteProfiles EH domain profile. 1 90 IPR000261 GO:0005515
Lal21g0072 1088 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 1 994 - -
Lal21g0072 1088 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 1017 1088 - -
Lal21g0072 1088 MobiDBLite consensus disorder prediction 342 402 - -
Lal21g0072 1088 Pfam EF hand 5 23 IPR002048 GO:0005509
Lal21g0072 1088 SMART eh_3 2 88 IPR000261 GO:0005515
Lal21g0072 1088 SMART eh_3 401 496 IPR000261 GO:0005515
Lal21g0072 1088 MobiDBLite consensus disorder prediction 772 850 - -
Lal21g0072 1088 MobiDBLite consensus disorder prediction 816 831 - -
Lal21g0072 1088 MobiDBLite consensus disorder prediction 1067 1088 - -
Lal21g0072 1088 MobiDBLite consensus disorder prediction 109 196 - -
Lal21g0072 1088 MobiDBLite consensus disorder prediction 551 578 - -
Lal21g0072 1088 PANTHER EH DOMAIN 1017 1088 - -
Lal21g0072 1088 PANTHER EH DOMAIN 1 994 - -
Lal21g0072 1088 Coils Coil 663 683 - -
Lal21g0072 1088 MobiDBLite consensus disorder prediction 121 161 - -
Lal21g0072 1088 ProSiteProfiles EH domain profile. 408 491 IPR000261 GO:0005515
Lal21g0072 1088 MobiDBLite consensus disorder prediction 175 190 - -
Lal21g0072 1088 Gene3D - 390 493 - -
Lal21g0072 1088 ProSiteProfiles EF-hand calcium-binding domain profile. 1 34 IPR002048 GO:0005509
Lal21g0072 1088 MobiDBLite consensus disorder prediction 799 815 - -
Lal21g0072 1088 SUPERFAMILY EF-hand 2 79 IPR011992 -
Lal21g0072 1088 CDD EH 4 70 IPR000261 GO:0005515
Lal21g0072 1088 SMART efh_1 411 439 IPR002048 GO:0005509
Lal21g0072 1088 SMART efh_1 37 65 IPR002048 GO:0005509
Lal21g0072 1088 SMART efh_1 3 31 IPR002048 GO:0005509
Lal21g0072 1088 SMART efh_1 445 473 IPR002048 GO:0005509
Lal21g0072 1088 ProSiteProfiles EF-hand calcium-binding domain profile. 441 476 IPR002048 GO:0005509
Lal21g0072 1088 Gene3D - 1 96 - -
Lal21g0072 1088 MobiDBLite consensus disorder prediction 236 264 - -
Lal21g0072 1088 MobiDBLite consensus disorder prediction 242 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0072 Lal-Chr21 508050 517311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0072 408 563 EF-hand Containing Proteins AT1G20760 28.485 2.03e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0072 K12472 - ccaj:109801808 1467.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0072 21 508050 517311 Lal21g0072 21 508050 517311 ECH