Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0070 ATGGTTTCAGAAACATTGGGGGCAGAGGAAGCTCTTTGTCAAGATATTCAGAGTTTGAGCGTGTCGAAGTGCCTTGTGAGGAGTGTTAGCCAGAAGTTGAGGAAGAGGAATAGTAACAGAAGTGCATCCAAAGAAGATAATGATGATGGAAAGGGAGTTTCTTTAAGGTGTCTAACTCTGTATGGTCGAGGTGGGGGATGCAAGGTTGGTGCTGATACCAGTGACGAATCTGGTGATTCGAGTGGTAGAAGGAGATCTAGTGCCAGTGAAGAAGGAAAGGGATATAGAACGATTCGTGGCCGTGAAGATACTTCTGTGAATTGCTTTTCGTATGGGGTGAAGGATAGGTTTTGTGGGAGACAACACAACAGAAAAAGTTCTGAATTTGAAGAGTTGGTAATAAACAGTAGAATGTATATCTTTCTTCCTGATGATATTCTCGAAATGTGCTTGGTTTGGCTCCCGCTGACGAGTCTCAATAATGCTCGCCTTGTTTGTAAGAAATGGAGGTCCTTGACTACCACCCCTAGATTCCTCCAAATGAGGAGGGAGGGTTCGTATCAAAATCCATGGTTGTTTCTGTTTGGTGTTGTTAAAGACGGCTTTTGCTCTGGCGAGATACATGCACTGGATGTGTCTCTGAATCAATGGCATAGGATGGATGCTGGTTTTCTCAAAGGGAGGTTCTTGTTCTCTGTGGCTAGTATACATGACGATATCTTCATTGTTGGAGGATGTTCTAGCTTGACTAACTTCGGGAATGTGGATAGGAGCTCATTCAAGACACACAAAGGGGTGGTAGCATTTAGTCCCTTGACAAAGTCATTGCGTAAAATACCACCTATGAAATATGCTAGATCAGTTCCTTTATTAGGAGTCTCTGAGGTCAGTTCGGACTTTTCATCTTGTCAAGGTCATAATAGTACGATGGATAGACGTTTTCCGAGATCAAGGATTGGCGGGATTTCAGATGTCTATGAGGATCCTCATAAGCTTTCAATGAGATGTCATTCCAGATCTTCTCTCAATGAGAGCGAAGCCTTGTCCTTGCCTAGTAGAAACGCATACAAATTCCTTAGACAACGAAGTGAACAGTCAAGCTCAAAGAGTGGTAAAAGATTTGTGTTGATAGCTGTAGGAGGTCTGGGATCTTGGGATGAGCCTCTGGACTCTGGAGAATTATATGACTCCATATCAAATAAATGGACTGAAATTCAGAGATTGCCTTTTGATTTTGGGGTTGCTTGTTCTGGAACTGTTTGTGGCAGGATGTTTTATGTTTATTCTGAGACAGACAAGCTTGCAGCATATGACATCGAACGAGGTTTCTGGATTGCAATTCAAACCACTACATTCCCGCCTCGTGTACATGAATACTACCCCAAACTTGTATCTTGTAATGGTCATCTTTTAATGCTCTCAGTTTCCTGGTGTGAAGGGGATGGTCAAATTGGGCGTCGAAACAAGGCTGTTAGAAAATTATGGGAGTTAGATCTCATGTATCTTACCTGGCGTGAGGTCTCAGTGCATCCTGATGCCCCAATGGACTGGAATGCGGTTTTTGTGGCAGACAAAAACCTGATTTTTGGGGTAGAGATGTTCAAAATATTTGGTCAGGTGTTGGATTTTTTCACTGTATGTGACGTGTCTGATATAGCAAACTGGAACCATATTTCAAGGAATCATGCTACTCAGGAGCTGGACGCTTCTTCGTGCTTTACCAAATCTGTGGTGGTACTACATCTTTGA 1749 0.4282 MVSETLGAEEALCQDIQSLSVSKCLVRSVSQKLRKRNSNRSASKEDNDDGKGVSLRCLTLYGRGGGCKVGADTSDESGDSSGRRRSSASEEGKGYRTIRGREDTSVNCFSYGVKDRFCGRQHNRKSSEFEELVINSRMYIFLPDDILEMCLVWLPLTSLNNARLVCKKWRSLTTTPRFLQMRREGSYQNPWLFLFGVVKDGFCSGEIHALDVSLNQWHRMDAGFLKGRFLFSVASIHDDIFIVGGCSSLTNFGNVDRSSFKTHKGVVAFSPLTKSLRKIPPMKYARSVPLLGVSEVSSDFSSCQGHNSTMDRRFPRSRIGGISDVYEDPHKLSMRCHSRSSLNESEALSLPSRNAYKFLRQRSEQSSSKSGKRFVLIAVGGLGSWDEPLDSGELYDSISNKWTEIQRLPFDFGVACSGTVCGRMFYVYSETDKLAAYDIERGFWIAIQTTTFPPRVHEYYPKLVSCNGHLLMLSVSWCEGDGQIGRRNKAVRKLWELDLMYLTWREVSVHPDAPMDWNAVFVADKNLIFGVEMFKIFGQVLDFFTVCDVSDIANWNHISRNHATQELDASSCFTKSVVVLHL 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0070 582 SUPERFAMILY Kelch motif 189 530 IPR015915 GO:0005515
Lal21g0070 582 ProSiteProfiles F-box domain profile. 136 182 IPR001810 GO:0005515
Lal21g0070 582 PANTHER OS09G0555300 PROTEIN 1 582 - -
Lal21g0070 582 Gene3D - 155 307 IPR015915 GO:0005515
Lal21g0070 582 Gene3D - 338 568 IPR015915 GO:0005515
Lal21g0070 582 MobiDBLite consensus disorder prediction 71 96 - -
Lal21g0070 582 MobiDBLite consensus disorder prediction 77 96 - -
Lal21g0070 582 PANTHER OS09G0555300 PROTEIN 1 582 - -
Lal21g0070 582 SMART fbox_2 142 182 IPR001810 GO:0005515
Lal21g0070 582 SUPERFAMILY F-box domain 141 204 IPR036047 GO:0005515
Lal21g0070 582 Pfam F-box domain 142 178 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0070 Lal-Chr21 498658 500406 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0070 - - ccaj:109802378 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0070 21 498658 500406 Lal21g0070 21 498658 500406 ECH