Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0061 ATGGCCTTTTCCTCCTCCTCCTCCTCCAAAACACTTGTCCTAGTATGTTCCATGTGCCTATTTTTGTCTTTGGCTTTTGCACATGATTTCTCTATTGTGGGCTATTCCTCTGAGGACTTAGTATCCATGAATAAGCTCATTCAACTCTTTGAATCATGGATGTCAAAACATGGCAAGATTTATGAGACCATTGAGGAAAAACTGCTCAGGTTTGAGATTTTCAAGGATAACCTCAAGCACATTGATGAGACAAACAAGGTGGTTAACAACTATTGGCTTGGACTGAATGAGTTTGCTGATTTGAGCCACCAAGAGTTTAAGCATAAGTACCTTGGTCTCAAGGTTGATTCTTCTAGAAGAAGGGAGTCCACTGAGGAATTCACTTACAGAGATGTTGATTTGCCTAAGTCAGTTGATTGGAGAAAAAAAGGTGCTGTCACCCCAGTCAAGAATCAAGGCTCATGTGGTAGCTGCTGGGCATTTTCCACTGTTGTAGCAGTTGAGGGAATAAACCAGATTGTGACAGGAAACTTAACATCTTTGTCTGAACAAGAGCTGATTGACTGTGACAGAACTTACAACAATGGCTGCAATGGGGGTCTCATGGACTATGCATTCACCTATATTGTACAAAATGGAGGACTACATAAAGAGGAAGATTATCCTTATCTTATGGAGGAAGGCACATGTGAAATGAGAAAGGAAGAAACCGAAGTTGTGACCATTAATGGGTACCATGATGTGCCACAAAACAATGAACAAAGCTTATTGAAGGCACTAGCAAACCAACCCCTGAGTGTGGCCATAGAGGCTTCAAGCAAAGATTTCCAATTTTATAGTGGGGGTGTATTTGATGGACATTGTGGAACTGAGCTAGATCATGGTGTGGCAGCAGTTGGATATGGAACATCAAAAGGGTTGGATTATATCACAGTCAAAAATTCATGGGGATCAAAGTGGGGAGAGAAAGGATACATAAGGATGAAGAGGAACATTGGAAAGCCTGAGGGTATTTGTGGAATCTACAAGATGGCTTCTTATCCCACTAAGAAGAAATAA 1059 0.4117 MAFSSSSSSKTLVLVCSMCLFLSLAFAHDFSIVGYSSEDLVSMNKLIQLFESWMSKHGKIYETIEEKLLRFEIFKDNLKHIDETNKVVNNYWLGLNEFADLSHQEFKHKYLGLKVDSSRRRESTEEFTYRDVDLPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVVAVEGINQIVTGNLTSLSEQELIDCDRTYNNGCNGGLMDYAFTYIVQNGGLHKEEDYPYLMEEGTCEMRKEETEVVTINGYHDVPQNNEQSLLKALANQPLSVAIEASSKDFQFYSGGVFDGHCGTELDHGVAAVGYGTSKGLDYITVKNSWGSKWGEKGYIRMKRNIGKPEGICGIYKMASYPTKKK 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0061 352 Pfam Papain family cysteine protease 134 349 IPR000668 GO:0006508|GO:0008234
Lal21g0061 352 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 309 328 IPR025661 -
Lal21g0061 352 PANTHER - 27 350 - -
Lal21g0061 352 SMART Inhibitor_I29_2 50 106 IPR013201 -
Lal21g0061 352 Pfam Cathepsin propeptide inhibitor domain (I29) 50 106 IPR013201 -
Lal21g0061 352 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 27 350 - -
Lal21g0061 352 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 292 302 IPR025660 -
Lal21g0061 352 SMART pept_c1 134 349 IPR000668 GO:0006508|GO:0008234
Lal21g0061 352 Gene3D Cysteine proteinases 29 351 - -
Lal21g0061 352 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 152 163 IPR000169 -
Lal21g0061 352 PRINTS Papain cysteine protease (C1) family signature 152 167 IPR000668 GO:0006508|GO:0008234
Lal21g0061 352 PRINTS Papain cysteine protease (C1) family signature 294 304 IPR000668 GO:0006508|GO:0008234
Lal21g0061 352 CDD Peptidase_C1A 135 348 IPR039417 -
Lal21g0061 352 SUPERFAMILY Cysteine proteinases 45 349 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0061 Lal-Chr21 451516 453122 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0061 K16290 - gmx:100788466 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0061 21 451516 453122 Lal21g0061 21 451516 453122 ECH