Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0059 ATGGCGTCCATTGTTTGCATCAGTTGTCTGCATATCCAACCCACACCATCTGCGCCCGACAAAGGTCTATTGTTGTCTCCCATTACATTCGAGCATCATCAACATAAACAAACACCATCTTTGCCTTCTTCTTTCACTGAAAAACAATATGCACTTAATAGAAGACAGCTTTTTCTTCACTCCTCAGTTGCTGCAATTACATCCTTAGCTACTGTTCCAATTGCATTGGCACTCAATGATGTGTCCGAGGATGTTCGTATCTACACAGACGAAGTGAACAAGTTCAAGATAGTTATTCCTCAAGAGTGGCAAGTAGGAAAAGGAGAGCCTAATGGATTTAAATCAGTAACTGCTTTCTACCCACAAGAGGTTTCTGACTCCAATGATTTTACAAAGATGGAATCATTTGGCAAAGTGGAAGAATTTGCTGAGACTCTGGTTGGTGGGTTGGACAGAAGCTGGCAAAGACCACCGGGTGTGGCTGCTAAACTCATAGGTTCTAAATCATCAAATGGGATATATTATATCGAGTATTCTCTGCAAAATCCTGGTGAGAGTCGCAAGCATCTATATTCAGCAATTGGGATGGCAACAAATGGATGGTATAACAGATTGTATACAGTGACAGGACAGTTTGTGGAAGAGGAAACAGACAAGTATGCATCCAAGATTAAGAAGGTGAACTCCTTGTAG 693 0.4141 MASIVCISCLHIQPTPSAPDKGLLLSPITFEHHQHKQTPSLPSSFTEKQYALNRRQLFLHSSVAAITSLATVPIALALNDVSEDVRIYTDEVNKFKIVIPQEWQVGKGEPNGFKSVTAFYPQEVSDSNDFTKMESFGKVEEFAETLVGGLDRSWQRPPGVAAKLIGSKSSNGIYYIEYSLQNPGESRKHLYSAIGMATNGWYNRLYTVTGQFVEEETDKYASKIKKVNSL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0059 230 PANTHER - 38 227 - -
Lal21g0059 230 Pfam PsbP 85 227 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Lal21g0059 230 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTIC 38 227 - -
Lal21g0059 230 SUPERFAMILY Mog1p/PsbP-like 86 226 IPR016123 -
Lal21g0059 230 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 77 229 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0059 - - lja:Lj1g3v3404330.1 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0059 21 441942 443409 Lal21g0059 21 441942 443409 ECH