Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0021 ATGGGTTCATACAGCAGCAGCAGCAGCAGCAGCATTTTCCTCTCTTTGGCTTTCTCCCTTCTCATTGCTTTCCCTATTGCTCTTTCAAGTGAGGTGACCCCACCCATCACCAACCATAGAGGCCGTACCCTCACTAATGGGCAATTGAACATTGGGATCGTATGGTATGGTCCAATCACTAATGTTCAAAGGAAAGCCATTCTTTCCTTCTTTAGGTCCCTCAACACCAATGATGCTCCACAACCTCAGGTTTCATCATGGTGGAGGGTTGTGGAGAGCTATGGTAGTGGTAAGAGGATCCCGGTGAAGGTGGTGAATCAAGTGTCTGATCCAAATTACTCACTTGGGAAAGTGTTGATCAAGGATTTCATCAAGGTGTTAATCCCTAAGGCAACTGCTGGAAAGTCAAATACAGTAGCTGTCATTATTGCCACAAAGGGTGTTACAGTTCAAGACATGTGCGCTGGATCATGTGCCCAGCATGGTCTTATTGAGAATCAAGTATATGTTGCAGTGGGGGACCCAGAAGAGGAGTGCCCTGAATGTGCATGGCCATTCATGAAGAGTCCAGGCAAGCCAGGTCCAACAGTGAGGCCACCAAGTGGGGATGTAGGAGCAGATGCCATGGTCAAATTGTTGGCTGGTGGTTTAGCCGGAGTAGTCACCAACCCATTCGGCGATGGCTTCTATTCAACCGCACGTGGTGATGTCACGGTTGAAGCCTCCACCAAGTGCCCTGATACCTTCGCCGCCGTCAATGGTGAAAAGGCAACCAACTTTGTCCTCCCTGCCATATGGAACCCTACAACTGCCACATGCTGGACTCATGGACCCTTATATGACTCCACTGCTTACACTAAGTGCAAAGTACAGCCTGAGGAGCCACTCTATAGAGGCGGAATTTTCAAGCCTGAGGAGCCACTCTTTGTGGGTGGTATCAACATCAACTATGTCAATGGTTATATTGTGCCTTCACTTATTCTGCATAATCTCACTCAGGGGACTATGTACTCCTTTTCCATATGGGTGAGAATTGAAGGTTCAAGTTTTGCCATGATAAGGGCTAGCCTTCAAACAGAAAAGGAGACATATGACTGCATTGGAACAGTTTTGGCCAACAGTGGATGCTGGTCATTTCTCAAGGGTGGATTTGTTCTAGACTGGCCTTCAAATTTGTCTACAATCTTATTTCAGAATGCTGATGGTAAAGATATCAATATAGATGTAGCTAGCCAATCATTGCAACCATTTACCAAGCAGGAATGGCGAGTCAATCAACATTATATAATTAATACTCGAAGAAAGCGTCCTGTGACTGTTCATGTGTCGGATAGTAATGGAAATATATCTCAAGGTGCTGCTATCAACATAGAGCAAATCTCTAAAGATTTTCCTATTGGATCTGCAATAGCGAAGACCATTCTTGACAACTTGCCTTATCAGAAATGGTTTGTGAAGAGGTTCAATGCTGCTGTCTTTGAAAATGAGCTCAAATGGTATGCCACCGAGTTACATCAAGGCAAGGTCAATTACACCATTCCGGACAAGATGATGCAATTTGTTAGAGCAAACAAAATCATAGCTAGAGGACACAATATATTTTGGGAAGACCCCAAATACACACCGGCGTGGATTCTTAACCTAACTAGTATCCAGTTACGATCAGCTGTTAATTCGCGAATAAAAAGTCTCATGAGACAGTACAAAGAAGAATTCATTCACTGGGATGTCAGCAATGAAAGGCTTCATTTTGATTTCTATGAGCAAAGGCTTGGACCTAATGCCTCATTGCATTTCTTTGAGACAGCGCATAAGTCAGATCCATTGGCAACCTTGTTTATGAATGACTTTAATGTTGTGGAAACATGCAGTGATGCAAATTCCACAGTTGATGCCTATATCTCACGGATAAGAGAAATGCAAAAGAATGGTGTGTTTATGGGAGGAATTGGCTTAGAAGGTCACTTCACAAAACCAAATCCTCCACTTATTAGAGCTATCTTAGACAAGTTAGCAACACTTGGCCTTCCCATTTGGCTTACTGAGGTTGATATAAGCAAGACACTTGATAAAGACACACAGGCAACTTATTTGGAAGAAGTGTTGAGGGAAGGCTTCTCACATCCTTCTGTGAATGGAATAATGCTTTGGACCGCATTACATTCAAAGGGGTGTTACCAAATGTGCCTCACAGACAATGATTTCAAGAACCTCCCAGCAGGTGATGTGGTGGACAAGCTTCTTGAAGAGTGGCAAACTGGTCTTGTAGAAGGAACAACAGATAATCATGGTTCCTATAGCTTTTATGGGTTCTTAGGAGAATATAGAATTAATGTCAAGTATGGCAAGAGAACTGCAAATTCAACCTTCTCACTATGTAAAGGTGAAGAAACTAGACATTTTTCTATGACTGTGTAA 2418 0.4322 MGSYSSSSSSSIFLSLAFSLLIAFPIALSSEVTPPITNHRGRTLTNGQLNIGIVWYGPITNVQRKAILSFFRSLNTNDAPQPQVSSWWRVVESYGSGKRIPVKVVNQVSDPNYSLGKVLIKDFIKVLIPKATAGKSNTVAVIIATKGVTVQDMCAGSCAQHGLIENQVYVAVGDPEEECPECAWPFMKSPGKPGPTVRPPSGDVGADAMVKLLAGGLAGVVTNPFGDGFYSTARGDVTVEASTKCPDTFAAVNGEKATNFVLPAIWNPTTATCWTHGPLYDSTAYTKCKVQPEEPLYRGGIFKPEEPLFVGGININYVNGYIVPSLILHNLTQGTMYSFSIWVRIEGSSFAMIRASLQTEKETYDCIGTVLANSGCWSFLKGGFVLDWPSNLSTILFQNADGKDINIDVASQSLQPFTKQEWRVNQHYIINTRRKRPVTVHVSDSNGNISQGAAINIEQISKDFPIGSAIAKTILDNLPYQKWFVKRFNAAVFENELKWYATELHQGKVNYTIPDKMMQFVRANKIIARGHNIFWEDPKYTPAWILNLTSIQLRSAVNSRIKSLMRQYKEEFIHWDVSNERLHFDFYEQRLGPNASLHFFETAHKSDPLATLFMNDFNVVETCSDANSTVDAYISRIREMQKNGVFMGGIGLEGHFTKPNPPLIRAILDKLATLGLPIWLTEVDISKTLDKDTQATYLEEVLREGFSHPSVNGIMLWTALHSKGCYQMCLTDNDFKNLPAGDVVDKLLEEWQTGLVEGTTDNHGSYSFYGFLGEYRINVKYGKRTANSTFSLCKGEETRHFSMTV 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0021 805 PANTHER GLYCOSYL HYDROLASE FAMILY 10 PROTEIN 271 803 - -
Lal21g0021 805 Gene3D - 318 413 - -
Lal21g0021 805 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 451 747 IPR001000 GO:0004553|GO:0005975
Lal21g0021 805 PANTHER GLYCOSYL HYDROLASE 271 803 IPR044846 GO:0004553|GO:0005975
Lal21g0021 805 SMART glyco_10 497 748 IPR001000 GO:0004553|GO:0005975
Lal21g0021 805 Pfam Glycosyl hydrolase family 10 459 719 IPR001000 GO:0004553|GO:0005975
Lal21g0021 805 SUPERFAMILY Galactose-binding domain-like 329 405 IPR008979 -
Lal21g0021 805 Pfam Phosphate-induced protein 1 conserved region 37 251 IPR006766 -
Lal21g0021 805 Gene3D Glycosidases 452 760 - -
Lal21g0021 805 SUPERFAMILY (Trans)glycosidases 451 753 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0021 Lal-Chr21 182884 190113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0021 277 805 Glycoside Hydrolase AT4G38650 64.916 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0021 - - gmx:100806005 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0021 21 182884 190113 Lal4g0362 4 2459960 2461295 LSH