Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0018 ATGACTAATATGCGTAGTAGCATTATTGTGGTCACTCTTCTGTTTTGGATTGTTACTATTGTGGGTGCAAAAGGACGTGCACCCGCTGTGAGGCTTCATAAGAAACATTCTGTGAGTGGTATTCACAATGTGAGTTATGATGGTAGGTCTCTCTTGATCAACAACCAACGCCACCTTCTCTTTTCCGGTTCCATTCATTACACTAGAAGCACCGCTGAGATGTGGCCTGACCTTCTTGATAAGGCAAGACATGGTGGTTTGAATGTCATTCAAACTTATGTCTTTTGGAATGCTCATGAGCCTGAGAAAGGCAAGTGGAACTTCCAAGGCAACTATGATCTTGTCAAGTTCATTAAACTCATTCAAGATAAAGGAATGTTTGCAACCCTCAGGGTTGGCCCTTTCATCCAAGCTGAATGGAATCATGGAGGACTTCCATATTGGCTAAGAGAGGTTCCTGGCATCATATTCCGCTCTAACAATGACCCATTTAAGCAACACATGGAAGCATATGTGACAAAGATCATAAATATGATGAAAGCTGAGAAGCTGTTTGCATCCCAAGGAGGACCAATCATTTTGGCACAGATTGAGAATGAGTACAACCATATCCAACTTGCTTATGACGAAGATGGTCCCAGTTATGTCCAATGGGCTGCAAATATGGCAGTGGCACAAAACATTGGAGTTCCATGGATCATGTGCAAGCAAAAGGATGCCCCTGATCCAGTCATCAATGCATGCAATGGAAGGCACTGTGGTGATACCTTCACTGGCCCAAACAAACCTTACAAGCCTGCCTTATGGACTGAGAACTGGACAGCTCAGTACAGAGTTTTTGGTGATCCTACTTCCCAAAGATCTGCTGAAGATATTGCCTTCTCAATTGCCCGCTTCTTCTCCAAGGATGGCATATTGGTCAACTACTATATGTACCATGGTGGAACAAACTTTGGAAGGACAAGTGCTGCATTCACCACAACCAGGTATTACGATGAAGCACCACTTGATGAATTTGGTCTACAAAGAGAACCAAAATGGAGCCACTTGAGGGATGCACACAGGTCTTTGAACCTATGCAAGAAGGCCCTACTCACTGGAAAAACCAGTGTACTGAGGCTGAATGAGTTTCATGAGATTAGAGTGTATGAGAAGCCTGAGAGTGACATATGTTCTGCTTTCATCACTAACAACCACACCATTGAAGCAGCCACCATTAACTTCAGAGGTAAAAAATTCTTTGTGCCACCACATTCCATTAGTGTCCTCCCTGATTGCAAGACTGTGGTCTTCAACACTCAGCAGATTGCTTCACAACATAATTCAAGGAACTTCAGGAGGTCAACTCTTGCAAACAATCACAAATGGGAGGTGTTTTCTGAGAGCATCCCATCAACTCAGCGAGTACCAGTCAGCCAAAAACTCCCTGCAGAGCTTTATAGTTTGCTTAAAGACACCACAGATTATGCATGGTACACCACTAGCTTCAACTTGGGTGCACAAGACTTGCCAAAGAATGGAGCAGCACCGGTTCTTCGTATTATGAGTCTTGGACATTCATTGCTTACTTTTGTAAATGGAGTATACATTGGATCTAATCATGGAACACACGAAGAGAAATCTTTTGAATTCCAGAAACCTGTAAACTTCAAGATTGGGAAGAACAGTATTTCCATATTGGCTAGCACAGTTGGACTACCTGACAGTGGAGCATACATGGAACACAGGTACGCTGGACCCAAATCCATAAGCATCCTTGGTCTCACTACAGGAACAATTGAACTCACTTCCAATGGTTGGGGTCATAAGGTTGGTCTGAAAGGTGAGAAGTTAAAGATCTTCAGTGAGGAGGGATCAAAGACAGTAAAGTGGAGAGCTGTTGTTGGAAAAGCACCAGCTCTGTCATGGTTGAAGACAAGATTTAACACTCCAGAGGGGAGGGATCCTGTGGCCATAAGAATGAATGGTATGGGAAAGGGAATGATTTGGGTGAATGGGAAAAGCTTAGGTAGGCACTGGATGAGTTTCCTTTCCCCAATTGGAAAGCCTACTCAGTCAGAGTACCACATTCCAAGATCATACCTAAACCCAAAAGACAACTTGCTAGTTATATTGGAAGAAGAGAGTGCAAATCCATCACAGGTTGAGATTCTCACTGTTGACAGAGATGTTATATGCAGCTTCATCACAGAGAACCATCCACCCAATGTGAATTCATTTGCATCGAAAGACATGAAATTTCATTCTATTATGGAAAATGTTAGACCAGAAGCTACACTCAAGTGTTCCAACTTCAAAAAGATTGTAGCAGTTGAGTTTGCAAGCTATGGTAACCCTTCAGGTTTTTGTGGAAGCTTTGCATTAGGGAACTGCAGTATGGGTGGTGCAAAGAGCATTGTTGAGGAGGAATGCATAGGAAAATATTCATGCAAGGTTGCATTGGAAAAGTTAAGCAAGAAAGGTAATGTGTGCCAAGGTTTGGAGAAGACACTAGCAATACAAGTGAGGTGTTCTCATTAG 2520 0.4286 MTNMRSSIIVVTLLFWIVTIVGAKGRAPAVRLHKKHSVSGIHNVSYDGRSLLINNQRHLLFSGSIHYTRSTAEMWPDLLDKARHGGLNVIQTYVFWNAHEPEKGKWNFQGNYDLVKFIKLIQDKGMFATLRVGPFIQAEWNHGGLPYWLREVPGIIFRSNNDPFKQHMEAYVTKIINMMKAEKLFASQGGPIILAQIENEYNHIQLAYDEDGPSYVQWAANMAVAQNIGVPWIMCKQKDAPDPVINACNGRHCGDTFTGPNKPYKPALWTENWTAQYRVFGDPTSQRSAEDIAFSIARFFSKDGILVNYYMYHGGTNFGRTSAAFTTTRYYDEAPLDEFGLQREPKWSHLRDAHRSLNLCKKALLTGKTSVLRLNEFHEIRVYEKPESDICSAFITNNHTIEAATINFRGKKFFVPPHSISVLPDCKTVVFNTQQIASQHNSRNFRRSTLANNHKWEVFSESIPSTQRVPVSQKLPAELYSLLKDTTDYAWYTTSFNLGAQDLPKNGAAPVLRIMSLGHSLLTFVNGVYIGSNHGTHEEKSFEFQKPVNFKIGKNSISILASTVGLPDSGAYMEHRYAGPKSISILGLTTGTIELTSNGWGHKVGLKGEKLKIFSEEGSKTVKWRAVVGKAPALSWLKTRFNTPEGRDPVAIRMNGMGKGMIWVNGKSLGRHWMSFLSPIGKPTQSEYHIPRSYLNPKDNLLVILEEESANPSQVEILTVDRDVICSFITENHPPNVNSFASKDMKFHSIMENVRPEATLKCSNFKKIVAVEFASYGNPSGFCGSFALGNCSMGGAKSIVEEECIGKYSCKVALEKLSKKGNVCQGLEKTLAIQVRCSH 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0018 839 Pfam Beta-sandwich domain in beta galactosidase 364 436 IPR041392 -
Lal21g0018 839 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 189 201 IPR019801 GO:0004553|GO:0005975
Lal21g0018 839 PRINTS Glycosyl hydrolase family 35 signature 54 71 IPR001944 GO:0004553|GO:0005975
Lal21g0018 839 PRINTS Glycosyl hydrolase family 35 signature 75 93 IPR001944 GO:0004553|GO:0005975
Lal21g0018 839 PRINTS Glycosyl hydrolase family 35 signature 130 149 IPR001944 GO:0004553|GO:0005975
Lal21g0018 839 PRINTS Glycosyl hydrolase family 35 signature 187 202 IPR001944 GO:0004553|GO:0005975
Lal21g0018 839 PRINTS Glycosyl hydrolase family 35 signature 268 283 IPR001944 GO:0004553|GO:0005975
Lal21g0018 839 PRINTS Glycosyl hydrolase family 35 signature 305 320 IPR001944 GO:0004553|GO:0005975
Lal21g0018 839 PRINTS Glycosyl hydrolase family 35 signature 324 340 IPR001944 GO:0004553|GO:0005975
Lal21g0018 839 PRINTS Glycosyl hydrolase family 35 signature 632 646 IPR001944 GO:0004553|GO:0005975
Lal21g0018 839 PRINTS Glycosyl hydrolase family 35 signature 659 675 IPR001944 GO:0004553|GO:0005975
Lal21g0018 839 Pfam Glycosyl hydrolases family 35 50 355 IPR031330 -
Lal21g0018 839 SUPERFAMILY Galactose-binding domain-like 420 579 IPR008979 -
Lal21g0018 839 Gene3D Glycosidases 41 360 - -
Lal21g0018 839 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 32 834 - -
Lal21g0018 839 Pfam Galactose binding lectin domain 760 837 IPR000922 GO:0030246
Lal21g0018 839 Gene3D - 746 839 IPR043159 -
Lal21g0018 839 Gene3D - 602 729 - -
Lal21g0018 839 SUPERFAMILY (Trans)glycosidases 43 360 IPR017853 -
Lal21g0018 839 PANTHER BETA-GALACTOSIDASE RELATED 32 834 IPR001944 GO:0004553|GO:0005975
Lal21g0018 839 SUPERFAMILY Galactose-binding domain-like 598 743 IPR008979 -
Lal21g0018 839 ProSiteProfiles SUEL-type lectin domain profile. 752 838 IPR000922 GO:0030246
Lal21g0018 839 Gene3D - 421 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0018 Lal-Chr21 169273 174593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0018 44 837 Glycoside Hydrolase AT2G16730 59.675 0.0 1035
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0018 - - gmx:102663614 1236.09