Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0010 ATGACGATCCATTCAGTGGTGATTCAGAAGCTATTGAGCACGAATGCTCAGCTGGGTAAGCGCGTGGCAAATCACCACTTCAAGGTCTACAGCTATGGATTCCGTAACAAAATGGCTATCATAGACTCTGACAAGACACTTATCTGTATGCGTAGCGCGTGCAACTTCATGGCCTCACTCGCTCGTGAACGAGGTCGGTTCATGTTCATTAACACAAACCCTCTCTACGATGAGATCTTCAATCTAATGACCAACAAAGTGGGTTCATATTCCCATTCTACCAATGCTCTATGGCGCACTGGTGGATTCCTCACCAATTCATATTCTCCTAAGAAGTTTCGTTCTCGTAATAAGAAGCTCTGTTTTGGTCCCTCTCAGCCTCCTGATTGTATCTTCATTCTTGATACTGATAGAAAGAGTTCTGTTATCAATGAAGCTCATAAACTCCAAATTCCTGTTGTTGCTTTCGTTGACTCTTCCATCCCTCTTGATGTTTATAATCGCATTGCTTATCCTGTTCCCGCCAATCCTTCTGTTCAATTCGTTTACTTGTTCTGTAACTTGGTCACCAAGACGCTTATGCTTGAGAAGAACAAGTTCACTCATCACCTTTCTCTTCCCAAAGTGGAAACTCAGAAAATTGAAGCAACCAAGAGGAAGAATGATTTGGCGAAGGTCGATGTCACTGTTGTTCCCTATGCTAATTTAGCACCCTTATCTGAAGATATAGAAGAAACTAAGAAGCTTTTGGACAAGCTTGTTGTTCTAAAGTTCAACAGTGCCATAGGAAAGGATATGGGTTTGGAAGGCCCCAAATCTGAAGTTGATATTTATAATGGGCTGACACTTCTGGACTTAATCATTAACCAGATTGAGACCATCAACTCCAAGTATGGATGCAATGTTCCATTTTTTGTCTTCAACAAAGATGACTCTCATGATAACACTTCAAAGGTTTTGGAAAAGTATTCAAAGTCAAGCATTGACATACATATGTTAAAGCAGGGTGAAGTTCCAGAATTGAAATTATTGGGTGCAAATTACAGCAAGGAGGAAGTGCATCCTTTTGACAATGGTGATATATTCCGTTCGCTAATGACTGGTGAAACCCTTGATTTATTATTATCACAGGGTAAGGAGTATGTCCTTGTGATGACCTCAGATAATGTGGCTACTATCATAGATCCTAGTATCCTTCTGGTGACACCAAGCCATTCATTTAATTTAATCTTGACTCCTATGAAGTTTAAGCTTAAGGAGATTGCTCGAAACCAAGATAAACAGTTGAAGGATAATTTCAAACTCATTGACACAACTAACATGTGGGTGAGTTTAAGAGCCATCAAGAGGCTTGTTGACAGTGATAGTCTAAATCATAAGAAGCCCTCAGTTTCAAAGTTATTTGAGAATGCGATTGGTCTCAGTGTGCCTGAATCTCGTTATCTTCCCTTGGATGCAACGTCAGATTTATTTATCCTACAGTCAGATCTATACACTTATGGAGAAGGTGTTTTAACCCGTAATCCAGCTAGAACCAACCCTTTAAATCCTGTGATAGACTTGGGACCTGAGTTTGATAAGGTGGGTGACTTCCAAAGTCGCTTCAGAACTATTCCAAGCATCATTGGGTTGGATAGTTTGATGGTGAGAGGTGATGTGTGGTTCGGAGCTAATATTACTTTAAAGGGGCAAGTGACTATTGCTGCAAAAGCAGGTGTGAAATTGGAAATTCCAGATGGGGTGGTGATTGATAATAAGGAGATCAATGACCTTGCAGACATTTGA 1785 0.4045 MTIHSVVIQKLLSTNAQLGKRVANHHFKVYSYGFRNKMAIIDSDKTLICMRSACNFMASLARERGRFMFINTNPLYDEIFNLMTNKVGSYSHSTNALWRTGGFLTNSYSPKKFRSRNKKLCFGPSQPPDCIFILDTDRKSSVINEAHKLQIPVVAFVDSSIPLDVYNRIAYPVPANPSVQFVYLFCNLVTKTLMLEKNKFTHHLSLPKVETQKIEATKRKNDLAKVDVTVVPYANLAPLSEDIEETKKLLDKLVVLKFNSAIGKDMGLEGPKSEVDIYNGLTLLDLIINQIETINSKYGCNVPFFVFNKDDSHDNTSKVLEKYSKSSIDIHMLKQGEVPELKLLGANYSKEEVHPFDNGDIFRSLMTGETLDLLLSQGKEYVLVMTSDNVATIIDPSILLVTPSHSFNLILTPMKFKLKEIARNQDKQLKDNFKLIDTTNMWVSLRAIKRLVDSDSLNHKKPSVSKLFENAIGLSVPESRYLPLDATSDLFILQSDLYTYGEGVLTRNPARTNPLNPVIDLGPEFDKVGDFQSRFRTIPSIIGLDSLMVRGDVWFGANITLKGQVTIAAKAGVKLEIPDGVVIDNKEINDLADI 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0010 594 PANTHER UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 1 594 - -
Lal21g0010 594 SUPERFAMILY Nucleotide-diphospho-sugar transferases 232 570 IPR029044 -
Lal21g0010 594 Gene3D - 2 192 - -
Lal21g0010 594 PANTHER - 1 594 IPR016267 GO:0003983|GO:0006011
Lal21g0010 594 Coils Coil 585 594 - -
Lal21g0010 594 Pfam Ribosomal protein S2 11 108 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lal21g0010 594 Pfam Ribosomal protein S2 126 192 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lal21g0010 594 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 193 484 IPR029044 -
Lal21g0010 594 Gene3D Hexapeptide repeat proteins 485 594 - -
Lal21g0010 594 Pfam UTP--glucose-1-phosphate uridylyltransferase 466 562 IPR002618 GO:0070569
Lal21g0010 594 Pfam UTP--glucose-1-phosphate uridylyltransferase 207 402 IPR002618 GO:0070569
Lal21g0010 594 PRINTS Ribosomal protein S2 signature 8 26 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lal21g0010 594 PRINTS Ribosomal protein S2 signature 128 145 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lal21g0010 594 PRINTS Ribosomal protein S2 signature 145 156 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lal21g0010 594 CDD RPS2 11 192 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lal21g0010 594 SUPERFAMILY Ribosomal protein S2 8 203 IPR023591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0010 Lal-Chr21 135685 142914 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0010 K00963 - gmx:100812583 872.848