Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0007 ATGAAGGGAGTAATAGTTAAGAACAAGAATGTTAGGGTTAGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATATCAGAATTCCGCACCTCGAAAGCTATATCTACATCATTCTGGTGATGATGGTTTCTATGATGTCGAAGCCATTCGCCGCAAGAGGATCCGCAAGGGTGAGGTCCAGTACCTTGTTAAATGGAAGGGATGGTCAGAGGGTGCAAATACTTGGGAGCCTCTCCACAATCTCCACTCTGTCTCTGATCTCATCCATTCTTTCGAACACAAACTTAAATCAGGGAAACTCGGTAACCGCAAACGCAAACATCTCCCTGTGCTTCAACAACCACCAAAGAAGAGGCCGCACCAACAGCAACGTGCTCCCACTTCTTACTGCCTTAGACATTTTGCAACTGATAACAACCATACACACTCTGCTCATCACACTATCAATCTTGTCCATCAACAGGGAGATGCTGCTGCCCCTCTTCCTCAAGACAACCAACCAAATCAACATCAAAGGAACAACGACGAAATCATTGATGATCCAAAGCTTAGTGAGCTTAAGGCAACATCAAACAATGCCCTTGATGCTGATGCAGATAAGCCAGAGCCTTCAACAGCCAACCCTCACATGGCCATGGAATCTGGCCCCCGCAGGGGAGCCAAAAGGAGAAAATCTGGTTCTGTCAAGAGGTTCAGGAGACAGGATGATGATGATCATGCATCTACGCCCAACCCAACAACCGTATCAGTTGAACAAGGCCCTAGAGGTGTGAACGGTGATGGTGGTGGGAATAATAATAACAATGGTCACATGATGGGTGATGTGGTATCTGCCTGCCATATTGTAAAGATAATAAGACCAATAGGCTATGTGACTTCTTTTTCTAATATTGTAGATGATCTTTCAGTCATCTTTGTGGCCTTGAGGTCTGATGGAACAGAAGTAACCGTGACCAATAAGTATCTGAAGGCAAACAATCCACTTCTACTGATCAATTACTATGAGGAGAATATCCGATACCATCCTATGTAG 1035 0.4435 MKGVIVKNKNVRVSEEEEEEEEEEEYQNSAPRKLYLHHSGDDGFYDVEAIRRKRIRKGEVQYLVKWKGWSEGANTWEPLHNLHSVSDLIHSFEHKLKSGKLGNRKRKHLPVLQQPPKKRPHQQQRAPTSYCLRHFATDNNHTHSAHHTINLVHQQGDAAAPLPQDNQPNQHQRNNDEIIDDPKLSELKATSNNALDADADKPEPSTANPHMAMESGPRRGAKRRKSGSVKRFRRQDDDDHASTPNPTTVSVEQGPRGVNGDGGGNNNNNGHMMGDVVSACHIVKIIRPIGYVTSFSNIVDDLSVIFVALRSDGTEVTVTNKYLKANNPLLLINYYEENIRYHPM 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0007 344 SMART chromo_7 44 97 IPR000953 -
Lal21g0007 344 Pfam Chromo (CHRromatin Organisation MOdifier) domain 45 94 IPR023780 -
Lal21g0007 344 ProSiteProfiles Chromo and chromo shadow domain profile. 45 104 IPR000953 -
Lal21g0007 344 SUPERFAMILY Chromo domain-like 41 98 IPR016197 -
Lal21g0007 344 MobiDBLite consensus disorder prediction 242 270 - -
Lal21g0007 344 Gene3D - 5 100 - -
Lal21g0007 344 ProSitePatterns Chromo domain signature. 62 82 IPR023779 -
Lal21g0007 344 SMART ChS_2 269 344 IPR008251 GO:0005634
Lal21g0007 344 MobiDBLite consensus disorder prediction 1 31 - -
Lal21g0007 344 MobiDBLite consensus disorder prediction 192 270 - -
Lal21g0007 344 CDD CD_CSD 45 93 - -
Lal21g0007 344 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 12 343 IPR044251 GO:0006325|GO:0031507
Lal21g0007 344 MobiDBLite consensus disorder prediction 99 114 - -
Lal21g0007 344 MobiDBLite consensus disorder prediction 98 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0007 Lal-Chr21 126083 128620 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0007 - - lang:109344091 587.03