Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1285 ATGTCTGTGTATGTTTGTATGTGCATCGAGGGAGTTAATTATTACTTTTATCCAAGTTTATTCTGTCTGATCTGTCATTCTAAGACTATTCATACTAAGTGGCTAATCATGGATGCAGCAGAAGAAATACCAGCTCAACCAGATAACGTCAAGAATCAGCTCTCAGATCCAAGATTGCCAATAGACATAACTTTATCTCTCTCTTCCGGGAATCAAATGTTGTCAAGCTACACAGTGGATGATGCTCTTGTGTGTTTGGGTTTTGGGAAATTCCAAATCCTGGTTCTTGCTTATGCTGGCACTGGTTGGGTTTCTGAAGCAATGGAAATGATGTTACTATCTTTCGTGGGCCCAGCTGTTCAATCTGCATGGAATCTCACTCCTCATCAGGAGAGCTTCATTACCAGTGTTGTCTTTGTTGGCATGTTTGTTGGCGCTTACTCTTGGGGCCTCCTTTCTGATCAATATGGAAGGAGGAAAGGATTCCTTGTCACAGCAACAATTACTGCCATTGCTGGTTTTCTCAGTGCATTCTCTCCTAACTATTTATTCTTGATGGCCCTTCGTTCTCTCGTTGGTCTTGGTTTGGGAGGAGGCCCTGTTTTACTATCATGGTTTCTTGAGTTTGTTCCAGCCCCCAATAGAGGTACCTGGATGGTTGTCTTTCAAGCTTTTTGGACTCTTGGCACCATTTTTGAAGCTTCACTTGCTTGGATTGTGATGCCAAAGCTGGGTTGGAGATGGTTACTTGCACTATCTTCCCTACCCACATCCTTCCTTCTTATGTTCTACAAATTGACTCCTGAGTCACCAAGATACCTATGCTTGAAAGGTAGAACGAATGATGCAATTACTGTTTTGGAGAAAATAGCAAGAGTAAATGGAACTAAACTACCCTATGGTATACTTGTTTCTGATCATCAAATTGAGCTACAGAAAGTTGATAACCCTTCCTTAGAGGAGGAGGACACAAGTTTACTATCACCAAGAAAAGATGAAATTGAACAATATCCTAATCCTAAAGGAATGATCTCCAAGGTAGGCGGTATCTCATCATTGATGATGCTTCTCTCACCACAATTGGCAAGGTCAACCCTTCTGTTATGGGTTGTGTTCTTTGGTAATGCGTTTTCATATTACGGGCTTGTTTTGTTGACCTCTGAATTGAACAACCCACATAGTAAATGCATACCACATAAATCGCAGAGAGAGATATCCCAGGACATTAGCTACAAAGATGTTTTTATTGCTAGCTTTGCAGAGCTTCCTGGGCTCCTCTTGTCAGCTTTAGCAGTAGATAAATTTGGTCGTAAGCTCTCAATGTCATCTATGTTCTTCATGTGTTGCATTTTCCTTCTTCCATTAATATTCCATCTGCCTCAAGGCTTAACAACCAGCCTCTTGTTTGGAGCTCGCATATGCATCACAACAACCTTCACAATTATGTACATATATGCACCAGAGATATACCCAACATCAGTAAGGACAACTGGTGTGGGAACTGCAAGCTCAATGGCCAGAATTGGAGGAATGTTATGTCCTTTAGTGGCAGTGGGTTTACTACATACTTGTCATCAAACTGTGGCTGTCCTTCTCTTTGAGATTGTTGCTCTTCTTTCTGGAATATGCGTTCTCTTCTTTCCGGTTGAGACCATGGGCCAAGAACTGCGAGATAATGTCTCAAATCTAAAACAGACCACCAAAGTATAG 1710 0.4152 MSVYVCMCIEGVNYYFYPSLFCLICHSKTIHTKWLIMDAAEEIPAQPDNVKNQLSDPRLPIDITLSLSSGNQMLSSYTVDDALVCLGFGKFQILVLAYAGTGWVSEAMEMMLLSFVGPAVQSAWNLTPHQESFITSVVFVGMFVGAYSWGLLSDQYGRRKGFLVTATITAIAGFLSAFSPNYLFLMALRSLVGLGLGGGPVLLSWFLEFVPAPNRGTWMVVFQAFWTLGTIFEASLAWIVMPKLGWRWLLALSSLPTSFLLMFYKLTPESPRYLCLKGRTNDAITVLEKIARVNGTKLPYGILVSDHQIELQKVDNPSLEEEDTSLLSPRKDEIEQYPNPKGMISKVGGISSLMMLLSPQLARSTLLLWVVFFGNAFSYYGLVLLTSELNNPHSKCIPHKSQREISQDISYKDVFIASFAELPGLLLSALAVDKFGRKLSMSSMFFMCCIFLLPLIFHLPQGLTTSLLFGARICITTTFTIMYIYAPEIYPTSVRTTGVGTASSMARIGGMLCPLVAVGLLHTCHQTVAVLLFEIVALLSGICVLFFPVETMGQELRDNVSNLKQTTKV 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1285 569 ProSiteProfiles Major facilitator superfamily (MFS) profile. 95 552 IPR020846 GO:0022857
Lal20g1285 569 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER-LIKE, MAJOR FACILITATOR SUPERFAMILY DOMAIN PROTEIN-RELATED 68 562 - -
Lal20g1285 569 SUPERFAMILY MFS general substrate transporter 80 558 IPR036259 -
Lal20g1285 569 Pfam Major Facilitator Superfamily 416 549 IPR011701 GO:0022857|GO:0055085
Lal20g1285 569 ProSitePatterns Sugar transport proteins signature 1. 428 443 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lal20g1285 569 Pfam Sugar (and other) transporter 129 293 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal20g1285 569 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 68 562 - -
Lal20g1285 569 Gene3D MFS general substrate transporter like domains 89 559 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1285 Lal-Chr20 17300985 17306134 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1285 41 566 Organic Solute Cotransporters AT3G20660 23.951 3.09e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1285 - - mtr:MTR_4g005090 787.334