Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1284 ATGGCGGCAACCCAATCACCACAGGCTCCGGATCGTACCACCGCAGAAGAGTTACCAGCCCAACCAGATAACATCAAGGATCATGGTACAACAACTATAAGTCAATCAGGATCTTTTGCTTCAGGTGCAGATCGCCCTTTGTACCCTCCCAATAATCTCTATGCTCCGCAGGCCCAGCCCCAGGCCCAGGCTTTCTACTACAGAGGTTTTGACAATGCCAATGGTGAATGGGATGAATACCCTTCATATGTCAATTCTGAGGGATTGGAAATCAGATCTCCTGGTGTCTACAATGAAAATCCATCTCTTATTTTCCATTCTGGATATGGTTTCAATCCACAAATGCCTTATGGCCCGTATTCCCCAGTCACCACACCCTTGCCTTCTGTAGGTGGAGACGCACAGTTATACTCTCAGCAATTTCCATATACCGGTCCACCTTATTACCATCAGCTGGTTCCTCCTAGCTTATCATATATTAATTCACCTACTCCAGTTTCGCAGCCAGAGCTCACCAACCTGGTAGGTATTGACCAACAAGTTGATAGCATGTTTTTTGGACCAAGACCTGGATATCCTTCAGTCGGATCTTTTGGTAGAGGCAGCTTTCCTGGAGCACCTGGTTCCTTAGGCTTTCATGAGTCCCAGCAAGGCTTTGATGCACCCAGATCTGGTGGGATATGGTCAGATAGCTCAAAGCCTTCAGAGAGACAGAGATCTTTGGTGCCTCTGTCCCCATCTGTTTCGCCACAGCCAATTGGCTCACATTGTTCATTTGGGCAGACTGTTGGAATGCCTTCTTATCAACAGGGATCACTTTATGGGTTTGGATCTGGTAGAGGCTACCTGCCTAACCAGGGTACTAGCTTTGGAGGCAATGCCATTTCCAGTCTTAGCACAAATGATAGGAGCTTCCTTTCTGTTGAAAATAGCAGACGGCAAGTCAGGGCAACTGCTGCTCTTTGCAATTGTAATGGTACCCTCGATATCCTTAGCGAGCAGAACCGAGGACCTAGGGCCTCAAAGCTGAAAAATCAAATTTCATCTGAAAATAATTCTGTTGATAACAATAAAAGTAATGCATCTATTGCCAAGTTCCAAAATGAATCAGTCAACCGATCAGATTTTGCAACGGATTACAAGGATGCCAAGTTTTTTGTCATCAAATCTTACAGTGAAGATAATGTTCACAAGAGCATCAAATATGGTGTCTGGGCTAGTACACCAAATGGAAATAGAAAGTTAGATGCTGCATATCACCAAGCAAAGGAGAAGCAAGATGCCTGTCCTATATTCCTCTTCTTTTCGGTAAATGCTAGTGCTCAGTTCTGTGGGGTAGCTGAAATGGTTGGACCTGTCAATTTTGAAAAGAGTGTGGACTTCTGGCAGCAAGATAAGTGGAGTGGGCAGTTTCCTGTCAAATGGCACATGATTAAAGATGTTCCGAACAGTCAGTTTCGTCACATTGTTCTTGAAAATAATGATAACAAGCCCGTCACCAACAGTCGAGATACCCAGGAGGTGAAATTGCAACAAGGAATAGAAATCTTGACCATTTTCAAGAACTACGAAACTGAAGTGTCGATCCTAGATGATTTTGATTTCTATGAAGACCGGCAGAAGGCTATGCAAGAACGAAAGGCAAGGCAGCAAGGCGGCGGCAGCGTCATGGGTGGTGTAGGAGTAGTTGGAGAAAGTGATCATAGGAATTCTTCTGCTAACATCATCAAGCAGATGTCGAAGAGCTTTGCTCAAGTTGTCCGCTTAGATGAGACCAATAGTGAAGTCATTGTTGCTGCTGATAGAGGAGGTGGTAACTTAGCCTCTGATGACAGCAATTCAGTGGCTGCCTCTTCAACTCAGACCAGTTAG 1872 0.4493 MAATQSPQAPDRTTAEELPAQPDNIKDHGTTTISQSGSFASGADRPLYPPNNLYAPQAQPQAQAFYYRGFDNANGEWDEYPSYVNSEGLEIRSPGVYNENPSLIFHSGYGFNPQMPYGPYSPVTTPLPSVGGDAQLYSQQFPYTGPPYYHQLVPPSLSYINSPTPVSQPELTNLVGIDQQVDSMFFGPRPGYPSVGSFGRGSFPGAPGSLGFHESQQGFDAPRSGGIWSDSSKPSERQRSLVPLSPSVSPQPIGSHCSFGQTVGMPSYQQGSLYGFGSGRGYLPNQGTSFGGNAISSLSTNDRSFLSVENSRRQVRATAALCNCNGTLDILSEQNRGPRASKLKNQISSENNSVDNNKSNASIAKFQNESVNRSDFATDYKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYHQAKEKQDACPIFLFFSVNASAQFCGVAEMVGPVNFEKSVDFWQQDKWSGQFPVKWHMIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLQQGIEILTIFKNYETEVSILDDFDFYEDRQKAMQERKARQQGGGSVMGGVGVVGESDHRNSSANIIKQMSKSFAQVVRLDETNSEVIVAADRGGGNLASDDSNSVAASSTQTS 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1284 623 MobiDBLite consensus disorder prediction 607 623 - -
Lal20g1284 623 ProSiteProfiles YTH domain profile. 383 520 IPR007275 GO:0003723
Lal20g1284 623 Pfam YT521-B-like domain 383 521 IPR007275 GO:0003723
Lal20g1284 623 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 11 616 IPR045168 -
Lal20g1284 623 MobiDBLite consensus disorder prediction 602 623 - -
Lal20g1284 623 MobiDBLite consensus disorder prediction 228 249 - -
Lal20g1284 623 MobiDBLite consensus disorder prediction 25 41 - -
Lal20g1284 623 Gene3D ph1033 like domains 359 535 - -
Lal20g1284 623 PANTHER EVOLUTIONARILY CONSERVED C-TERMINAL REGION 5 11 616 - -
Lal20g1284 623 MobiDBLite consensus disorder prediction 206 249 - -
Lal20g1284 623 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1284 Lal-Chr20 17287870 17293143 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1284 K20102 - gmx:100816860 980.319