LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal20g1253	ATGGCTGCAACAACTACAACATATCATTTGGTTCCAAATCCAAAAACATTCTCAAATTTCCTCACAAACCCATTTTCCAATCATGTTTCATTCCATGATTCCACAATTAGAAAACAAAATAAAAAAGTATCTCACATTACAAATATAAAAAAGAAGAACCCATGGCTTGACCCATTTGATGATGGAGAAGACCCAGAAATGGAATATGGGTCATTGTTTGTAGATGGTAAACAAGAAGAGGATCCAAGGCTACCTGATGACCCTAATAGCCCTTTTGGATTCTTGAAATTCCCACCTGGATATTCTGTTGAGCTAGCCTCCTTGCCACTCAAGGTGAGAGGAGATGTTAGGAATTGCTGTTGTGTGGTATCAGGTGGTGTTTATGAGAATGTATTGTTCTTTCCAATAATTCAGTTAATTAAGGATAGGTACCCTGGTGTGAAGATTGATATTGTAGCATCCCCTAGAGGGAAACAGACTTATGAAATGAATAAGAATGTAAGGTATGCAACTGCTTATGACCCTGATGATCATCTTCCTGACCCTGCTGAATATACTGATATGGTTGGACTTTTAAAGAATAGGTACTATGACATGGTTTTAAGCACCAAATTGGCAGGCCTAGGACATGCAGCATTTTTGTTTATGACAACTGCAAGAGATAGAGTTAGCTATGTATACCCAAATGTGAATGCTGCAGGAGCAGGTTTACTTTTATCTGAAACATTCACACCTGATACTCTAAATCTCTCAGATGGAGGATATAACATGTATCATCAGATGGCTGAGTGGCTCGGAAAACCATTTCGGAGCGTTCCAAGGCATGTTGTGTCACCACTTAGGGTATCAATTTCAAGGAAAGTGAAGGAGGTTGTGAAGGAAAAGTATACAAAAGCAGGTGCAGAAAATGGAAAATATGTTGTAATTCATGGAATAGAATCAGATTCAAAGGCTTCAATGCAGTCTAGGGGTGATCTTGATAGCTTGCTACCCATTGAAGTTTGGGCTGAAATTGCTGATAGTATAAGGGATTTCACACCAGTTTTTGTGATTCCACATGAGAAAGAAAGGGAAAATGTGCAGGAATATTTTGAAGATGCTTCCATAGTCTTCATTACCACCCCAGGACAGCTGGCTGCTCTTATTAATGATTCAGTTGGAGTGATAGCTACAAATACAGTTGCGATTCAGCTCGCGATTGCGCGCGACAAACCCAGTATCGCGCTATTTAGCTCGGAAGAGAAGGCGAACAAGTTTGTTCCGAAGGCGGAAGAGAAGAAATGCATTGTAATACCATCCAAGACAGGGAAGTTGATTGATATTGATGTTGAGGCTGTCAAAAATGCACTTCAAACTTTCAATGTGGCTCTAGCTTTTGTATAG	1383	0.397	MAATTTTYHLVPNPKTFSNFLTNPFSNHVSFHDSTIRKQNKKVSHITNIKKKNPWLDPFDDGEDPEMEYGSLFVDGKQEEDPRLPDDPNSPFGFLKFPPGYSVELASLPLKVRGDVRNCCCVVSGGVYENVLFFPIIQLIKDRYPGVKIDIVASPRGKQTYEMNKNVRYATAYDPDDHLPDPAEYTDMVGLLKNRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYVYPNVNAAGAGLLLSETFTPDTLNLSDGGYNMYHQMAEWLGKPFRSVPRHVVSPLRVSISRKVKEVVKEKYTKAGAENGKYVVIHGIESDSKASMQSRGDLDSLLPIEVWAEIADSIRDFTPVFVIPHEKERENVQEYFEDASIVFITTPGQLAALINDSVGVIATNTVAIQLAIARDKPSIALFSSEEKANKFVPKAEEKKCIVIPSKTGKLIDIDVEAVKNALQTFNVALAFV	460

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal20g1253	460	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	130	452	-	-
	Lal20g1253	460	Gene3D	Glycogen Phosphorylase B;	129	263	-	-
	Lal20g1253	460	PANTHER	PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 1, CHLOROPLASTIC	15	460	IPR044983	GO:0009507\|GO:0009773\|GO:0010598
	Lal20g1253	460	Gene3D	Glycogen Phosphorylase B;	291	457	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal20g1253	-		-	gmx:100802136	721.079

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal20g1253	20	17047555	17050793	Lal20g1253	20	17047555	17050793	ECH