Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1245 ATGGAAATTATGGATCTTCCTACTTCCTGGGATTCTCTTCGCAAACAGGCAAGAAAACTTGAAGCTCAGCTGGATGAGCGGATGAGTTCTTATCGTAAATTGGTTTCTACTAATGCTTCTATAAAAGCTGATTCTGCAGAGAGTGATCTAGAATCTTGGATTGAACAATTACTGAAGCAACTTCAACAAGTAAACTCGCAGATGCAAGCTTGGGTATCATCTGGTGGATCAGAAATGGTTTCTCATACCTTGACTAGACACCAAGAAATTCTTCAAGATCTCACTCAGGAATTTTATCGTCTTCGCTCTAGTCTTCGAGCTAAGCAAGAACATGCATCACTGCTTGAGGATTTTAAAGAATTCGATCGGTCAAGATTAGACTTGGAAGAAGGTGGAGGATCTGAACAGCATGCACTCCTAAAAGAGCATGCATCTATTAGCCGAAGTACAGGACAGATGGACAGTGTTATTTCACAAGCACAAGCAACACTTGGCACACTTGTCTTCCAGCGTTCAACTTTCGGTGGCATCAATTCTAAGCTCAGCAATGTGAGCAGTCGCCTCCCAACGGTAAATAACATACTTTCTGCAATAAAGAGAAAAAAGTCAATGGATACCCTTATACTTTCCTTTGTTGCATCCATATGCACATTTCTCATTCTCATCTATTGGCTAACAAAATGA 684 0.4064 MEIMDLPTSWDSLRKQARKLEAQLDERMSSYRKLVSTNASIKADSAESDLESWIEQLLKQLQQVNSQMQAWVSSGGSEMVSHTLTRHQEILQDLTQEFYRLRSSLRAKQEHASLLEDFKEFDRSRLDLEEGGGSEQHALLKEHASISRSTGQMDSVISQAQATLGTLVFQRSTFGGINSKLSNVSSRLPTVNNILSAIKRKKSMDTLILSFVASICTFLILIYWLTK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1245 227 Coils Coil 54 74 - -
Lal20g1245 227 Pfam Snare region anchored in the vesicle membrane C-terminus 138 202 - -
Lal20g1245 227 PANTHER GOS-28 SNARE- RELATED 4 227 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Lal20g1245 227 PIRSF Golgi_SNARE 4 226 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Lal20g1245 227 PANTHER GOLGI SNAP RECEPTOR COMPLEX MEMBER 1 4 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1245 Lal-Chr20 16962345 16967874 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1245 K08495 - gmx:100797885 375.555