Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1243 ATGGCAGCACGAATGTTCTGTACCCAGAGAAAAACCCTAACCCACAAACTACTTCACCATCGCAATCACAATCAACTATTACTATCATGTAATTTACCTCGAAGAACATATATCTCTCACATGCGCAAATCAGCGTTTGAAGGTACCATTTTGAGACAAATCCGCCAACAAATTCAATTTCATCTTCAATCCTATCCTCCAAAACAGCCTATTATCAAGTTTGACTCCTTTACGGTGGATGGCCGGCCTGGAGAACGATGTATTAGATTGAAAAGACAATATGCAGATGAAGATATTAAAGTTGAAGTCACCATGTTTGATGGAGCCGCTCCTGCTCCAAGTGCAAATGCAAGTGATGGTGTACCCAATGCGGACGATATGCAGCTACACATTACCTTAATTGTTAGCATATCCAAGGAAGAACGTTACAGGGTTCTGGAAATCGTGTGCTCTGCTTGGCCCGACAGTATAGAGATAAATAGGCTGTTGACGCGTACAAATAAAAAGATGTTAGCTGAGCCCTATGCTGGTCCTGAATTCGAGGAATTGGATGATGAGTTGCAAGATAGCCTCTATGATTTCTTGGAAGTAAGGGGTATAGACGATAAACTTGCCGTTTTCTTGCACGATTACATGAAAAATAAGGATAAAACAGAGTTCAGAGGATGGATGGAGAGAGTTAAGTCTTTTATAGAAAGGAAGTGA 705 0.4099 MAARMFCTQRKTLTHKLLHHRNHNQLLLSCNLPRRTYISHMRKSAFEGTILRQIRQQIQFHLQSYPPKQPIIKFDSFTVDGRPGERCIRLKRQYADEDIKVEVTMFDGAAPAPSANASDGVPNADDMQLHITLIVSISKEERYRVLEIVCSAWPDSIEINRLLTRTNKKMLAEPYAGPEFEELDDELQDSLYDFLEVRGIDDKLAVFLHDYMKNKDKTEFRGWMERVKSFIERK 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1243 234 PANTHER COMPLEMENT COMPONENT 1 23 232 IPR003428 GO:0005759
Lal20g1243 234 Pfam Mitochondrial glycoprotein 72 231 IPR003428 GO:0005759
Lal20g1243 234 Gene3D Mitochondrial glycoprotein 47 231 IPR036561 -
Lal20g1243 234 PANTHER MITOCHONDRIAL GLYCOPROTEIN FAMILY PROTEIN 23 232 - -
Lal20g1243 234 SUPERFAMILY Mitochondrial glycoprotein MAM33-like 46 232 IPR036561 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1243 Lal-Chr20 16952458 16955012 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1243 - K15414 gmx:100797340 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1243 20 16952458 16955012 Lal1g1222 1 13473366 13476119 LSH