Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1218 ATGAACAAAATGAGTGCAATTGGAGGAGTTATGGCCATATTAATGGTTCTACAATGCACAGAGGCAGTGACAGTTCATGTTGTTGGAGATGGTTTGGGTTGGACAGTTCCAGAAGATTCATCTGCATACCAAAATTGGGCTTCTACCAATAATTTTGTACTTGGTGATATTCTATCATTCAATTTTGAGACAAATAGGCATGATGTAGCAGAAGTAGCAAAAGGGTCCTATGAAACATGCACTTCAAACAACACAATAGGCACAATCTTATTAACTGGTCCAACCAACATAACCCTCAATAGGGCAGGTGAACATTTCTATATTTGCACCATTGGTCAACACTGTAATGGTGGCCAAAAATTAGCCATCAATGTCTCCACCACTCCCTCCACCACCGGAGCTTTACCACCTTCCACCGGAGCTTTTCCACCTTCTACCACCACCACCCCACCACCACCATTTTCAGCAGCCAGTGGCAGTGCTTTAGCTAGTGTTGCTTTGCTCTTATTCTCATTGTTCATGGGTATAGCATTTTAG 537 0.4264 MNKMSAIGGVMAILMVLQCTEAVTVHVVGDGLGWTVPEDSSAYQNWASTNNFVLGDILSFNFETNRHDVAEVAKGSYETCTSNNTIGTILLTGPTNITLNRAGEHFYICTIGQHCNGGQKLAINVSTTPSTTGALPPSTGAFPPSTTTTPPPPFSAASGSALASVALLLFSLFMGIAF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1218 178 MobiDBLite consensus disorder prediction 129 154 - -
Lal20g1218 178 ProSiteProfiles Phytocyanin domain profile. 24 127 IPR003245 GO:0009055
Lal20g1218 178 Pfam Plastocyanin-like domain 34 119 IPR003245 GO:0009055
Lal20g1218 178 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
Lal20g1218 178 Gene3D - 24 136 IPR008972 -
Lal20g1218 178 PANTHER BLUE COPPER PROTEIN 10 147 IPR039391 GO:0009055
Lal20g1218 178 PANTHER UMECYANIN-LIKE 10 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1218 Lal-Chr20 16676334 16677814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1218 26 136 Miscellaneous Gene Families AT5G20230 41.441 2.24e-26 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1218 - - cit:102621423 167.933