Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1214 ATGGCCTTGGCTCGTTTGGCTTTGAAATTTTTGCAGCAAAGGACACCTGTGCATGTTTCCTCTTCCTTGAAGCAGAGGTGGAATGGCAATAATGAGTTTCTGAGAAGGTTTTCTAGTGAAGCAAATGATAAGGGAAAATCTGAAAGTACTGAAGTTTCTGTCTCTGAAGACAAAAGGAATAGGAATGACAACAAGACGGGGCGGGACTGCGTTTGTGTCAACCCAATCCCGAATTTGAAATTCAAAACTCGAACCCGAATTAAGCGGGGCCTAGGGAATGCACTGATGCAAGCAACTAAGAACATCAACAATCTCTTTGACACCATGAACATAACACCATGGTCACTAAGTGGACACATTAAAGAGAAAGATGAGCACTACAAATTAAGGTATAACATGCCAGGGATTGCCAAAGAGGATGTGAAGATCACAATTGATAATGGGTTATTGAGAATAAAGGGAGAACACAAGGAAGAAAATGAAGAAAATGGTGATGACTATTGGTCATTAAGTACCTATGGATATTACAATAGTAGTATTGTTTTGCCTAATGATGCTAAGGTTGATGAAATTAAGGCAGAGTTGAAAGATGGTGTGTTGATTGTGACTATTCCTAGGACTGAAAAGCCTAAAAAGGATGTGAAACAAGTTATTGTTCATTGA 663 0.3922 MALARLALKFLQQRTPVHVSSSLKQRWNGNNEFLRRFSSEANDKGKSESTEVSVSEDKRNRNDNKTGRDCVCVNPIPNLKFKTRTRIKRGLGNALMQATKNINNLFDTMNITPWSLSGHIKEKDEHYKLRYNMPGIAKEDVKITIDNGLLRIKGEHKEENEENGDDYWSLSTYGYYNSSIVLPNDAKVDEIKAELKDGVLIVTIPRTEKPKKDVKQVIVH 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1214 220 CDD ACD_sHsps-like 120 206 - -
Lal20g1214 220 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 105 220 IPR002068 -
Lal20g1214 220 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 85 220 - -
Lal20g1214 220 MobiDBLite consensus disorder prediction 38 66 - -
Lal20g1214 220 MobiDBLite consensus disorder prediction 38 67 - -
Lal20g1214 220 Gene3D - 82 219 IPR008978 -
Lal20g1214 220 Pfam Hsp20/alpha crystallin family 120 219 IPR002068 -
Lal20g1214 220 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 85 220 - -
Lal20g1214 220 SUPERFAMILY HSP20-like chaperones 109 217 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1214 Lal-Chr20 16649823 16651897 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1214 K13993 - gmx:100787482 230.72