Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1166 ATGGCAGGATCCATTGGAGTACTCCTTGTAGCACAAGTCATGCCTTACCTCGAACAACAACTCAATACTCGCTACCAACTCTTCCGAATCTGGGACTATCCTCAACAAACCCACCTTTTCGCAAACCACGCCGCCACCATCCGCGCGGTGGTTGCTGGCTCTAACGCCGGCGCCGACGCCGAGCTGATCGACGCCCTGCCGAAGCTGGAGATAATTTCAACATTCAGCGTTGGAATGGACAAAATTGATTTGGAAAAGTGTAAGGAGAAAGGGATTAGAGTGTGTAATACTCCTGATGTGTTGACTGATGAGGTTGCTGATTTGACTATTGGTTTGATTCTTGCGGTGTTGAGGAGGATTTGTGATTGTGATCGTTTTGTTAGGAGTGGGAATTGGAAACTTGGTGATTATAAATTAACCACTAAGTTCTCTGGGAAAACAGTTGGAATTATTGGGCTGGGAAGGATTGGCTCAGCAGTTGCAAAAAGAGCTGAAGGATTTAACTGTTCAATAAGTTACTACTCTAGAACTGAAAAAAGAGATTCAAAATACAAGTACTATCCAAGTGTTGTTGAGTTAGCCTCCAACTGCCATATACTAGTTGTTGCTTGCCCTCTTACGGACGAAACACATCACATCGTCAACCGGGAGGTCATCAACGCGCTCGGTCCAAAGGGTGTCCTAATTAACATTGGGCGTGGTAAACATGTTGATGAACCGGAGTTGGTCTCTGCGCTGCTCGAAGGTCGATTGGGTGGTGCTGGTCTAGATGTGTTTGAAAATGAGCCTCATGTTCCAAAAGAGCTATTTGGGTTGGAAAATGTTGTCTTGTTGCCGCACATTGGAAGTGCCACGATAGAAACTCGAACCGCCATGGCCGACCTTGTCCTTGGAAACCTGGAGGCTCACTTCCTAGGGAAACCTTTGCTAACTCCTTGGATTTAG 945 0.4635 MAGSIGVLLVAQVMPYLEQQLNTRYQLFRIWDYPQQTHLFANHAATIRAVVAGSNAGADAELIDALPKLEIISTFSVGMDKIDLEKCKEKGIRVCNTPDVLTDEVADLTIGLILAVLRRICDCDRFVRSGNWKLGDYKLTTKFSGKTVGIIGLGRIGSAVAKRAEGFNCSISYYSRTEKRDSKYKYYPSVVELASNCHILVVACPLTDETHHIVNREVINALGPKGVLINIGRGKHVDEPELVSALLEGRLGGAGLDVFENEPHVPKELFGLENVVLLPHIGSATIETRTAMADLVLGNLEAHFLGKPLLTPWI 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1166 314 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 IPR029752 -
Lal20g1166 314 Gene3D - 102 285 - -
Lal20g1166 314 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 282 IPR006140 GO:0051287
Lal20g1166 314 CDD HPPR 5 304 - -
Lal20g1166 314 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 4 314 - -
Lal20g1166 314 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 7 135 - -
Lal20g1166 314 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 12 309 IPR006139 GO:0016616|GO:0051287
Lal20g1166 314 Gene3D - 18 308 - -
Lal20g1166 314 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 102 283 IPR036291 -
Lal20g1166 314 PANTHER D-GLYCERATE DEHYDROGENASE/HYDROXYPYRUVATE REDUCTASE 4 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1166 Lal-Chr20 16115718 16119455 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1166 - K18606 gmx:100779623 524.242