Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1164 ATGGCTTCTTTTGCAACCTTAGCTATTGTTCAACCAGCTTCAGTTAATGGCCTTTCTGGAAGTACCCTTATTGGAAATAAGATCTCTTTCAAGTCATCTCACAAGAGTTTCAAATCCAAGAACAACTTTAGGAGTGGTGCTGTGGTAGCAAAGTATGGTGACAAGAGTGTGTACTTTGATTTGGAGGATCTAGGCAACACTACAGGGCAATGGGACTTGTATGGTTCAGATGCACCTTCACCCTACAACCCTCTTCAGAGCAAGTTCTTTGAAACATTTGCTGGTCCATTCACAAAGAGGGGATTGTTGCTGAAGTTTCTGATACTAGGTGGTGGTTCAACCCTTGCATATTACAGTGCCACAGCTTCAGGTGACATTCTACCTATCAAAAGGGGTCCACAACTTCCACCAAAACTCGGTCCACGTGGCAAGATTTAA 438 0.4338 MASFATLAIVQPASVNGLSGSTLIGNKISFKSSHKSFKSKNNFRSGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAGPFTKRGLLLKFLILGGGSTLAYYSATASGDILPIKRGPQLPPKLGPRGKI 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1164 145 Pfam Photosystem I reaction centre subunit VI 8 145 IPR004928 GO:0009522|GO:0009538|GO:0015979
Lal20g1164 145 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC 1 145 IPR004928 GO:0009522|GO:0009538|GO:0015979
Lal20g1164 145 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC-LIKE 1 145 - -
Lal20g1164 145 Gene3D - 99 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1164 Lal-Chr20 16103905 16107309 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1164 K02695 - gmx:100499832 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1164 20 16103905 16107309 Lal20g1164 20 16103905 16107309 ECH