Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1157 ATGGTCGATATGTCCGAGTGGTTAAGGAGACAGACTCGAAATCTGTTGGGCTTTGCCTGCGCAGTTATGGCTTCCTCTCTTTTCCAAAACCCTAACTTCCTTCAACCCCTTCCACCAACCTCCACCGCCACTCGCCGGAGCTACTTTCCGGTACGGTGTGGCGGCCCTCGTTCCCAGCGTGGACCTCTCGTCAAAGGTAGAGTACTAAGCATCGAAGCAATCCAAGCCATTCAAACCCTCAAACGTCTCCACCGAACTAACCCACCCAACATATCCCACGCGCTCTCATCAACCCTCACGCGCCTCCTAAAATCCGACCTCGTCGCCGCGCTGCGGGAGCTCATACGCCAGCAGAACTGCACCCTCGCAATGCGCGTGTTCTCCACGCTCCGGTCGGAGTACGGTGCTGACCTCACGCTCCATGCCGAGATGGCGAAGGCGCTCGGGAATTGCGAAATGTTTGAGGAATTGGATAATCTGATCGTTGAATTGGAAGAAGGTGGTGAGATTGATTGTGGTGATTATAAAGGGTTGGTGAATTTGATCAAAGCTGTGGTTGGAGCTAAGAGGAGAGAATCAACGGTTAGGGTTTATGGGTTGATGAAGAAATGTGGTTGGGGAAGTGTTGTTGTGCCTGATGAGTATGTGGTTCAGGTTTTGGTTAATGGGTTTAAGAGTTTTGATGAAATTGAACTTGCTCATGAGGTTCAACATGAATGTGATACAGCATTTTCTAATTTCTCTAGGGCCAAATTGGATAAATTGACAATTTAG 774 0.4948 MVDMSEWLRRQTRNLLGFACAVMASSLFQNPNFLQPLPPTSTATRRSYFPVRCGGPRSQRGPLVKGRVLSIEAIQAIQTLKRLHRTNPPNISHALSSTLTRLLKSDLVAALRELIRQQNCTLAMRVFSTLRSEYGADLTLHAEMAKALGNCEMFEELDNLIVELEEGGEIDCGDYKGLVNLIKAVVGAKRRESTVRVYGLMKKCGWGSVVVPDEYVVQVLVNGFKSFDEIELAHEVQHECDTAFSNFSRAKLDKLTI 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1157 257 Gene3D Tetratricopeptide repeat domain 68 243 IPR011990 GO:0005515
Lal20g1157 257 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 35 249 IPR044190 GO:0000373|GO:0003723|GO:0009658
Lal20g1157 257 PANTHER PROTEIN THYLAKOID ASSEMBLY 8, CHLOROPLASTIC 35 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1157 Lal-Chr20 16050224 16051156 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1157 - - gmx:100799612 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1157 20 16050224 16051156 Lal20g1157 20 16050224 16051156 ECH
Lal20g1157 20 16050224 16051156 Lal1g1324 1 14974582 14975262 LSH