Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1142 ATGAAAATAATATTTGTGCTTCTTTTCACTCTTGCTACATCTATAGCAACAAGCCATGGCTTAGACTTAGACCATGGAATAGACTTCAAAATTCACCCACTTCGGTTGAAATCTGGCTCTGGTGGCCACTACATTAAAGGCATAACATGCTCAAGTTGGAGGCTTGGTGTAGAAACACACAACATCATTGATTGGAAAACTATACCACAAGAATGTGAAGATTATGTAGGAAACTATATTCTAGGAGAACAATATAGAGAAGACTCTAAAGTAGTTATTGGTGAAGCTTATTTTTATGCCAAGAGTCTCAATCTTACCAAAGATGGAAAAAACATTTGGGTTTTTGACATAGATGAGACTTCACTATCTAACCTCCAATATTATGCTGACCATGGATTTGGGGTGGAACCGTTTAATGCAACGAGTTTTAATGAATGGGTTGAGCTTGGAAAAGCACCAGCATTGCCAGAGACTAAGAAACTGTACAAGAAATTGTTATCTTTTGGCATCAAGATTGCATTCTTAACTGGAAGATCAGAGAGTCAAAGGGATATAACTGCTAAGAATCTAAAAGACGTTGGGTACAACAAATATGACAAGTTAATTGTCAAGGATGCAATAAAATATAAAGGTAAAACAGCAGTTACATATAAATCAGTGGAGAGAAAGAAGTTAGAGGAAGAAGGATACAGAATCATTGGAAACATAGGAGATCAATGGAGTGATATCTTGGGCACCAACACAGGCAAAAGGACCTTCAAGTTGCCTGATCCACTCTACTACATTGCTTAA 792 0.3699 MKIIFVLLFTLATSIATSHGLDLDHGIDFKIHPLRLKSGSGGHYIKGITCSSWRLGVETHNIIDWKTIPQECEDYVGNYILGEQYREDSKVVIGEAYFYAKSLNLTKDGKNIWVFDIDETSLSNLQYYADHGFGVEPFNATSFNEWVELGKAPALPETKKLYKKLLSFGIKIAFLTGRSESQRDITAKNLKDVGYNKYDKLIVKDAIKYKGKTAVTYKSVERKKLEEEGYRIIGNIGDQWSDILGTNTGKRTFKLPDPLYYIA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1142 263 CDD HAD_VSP 76 262 - -
Lal20g1142 263 PANTHER OS05G0192100 PROTEIN 7 263 - -
Lal20g1142 263 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 42 262 IPR005519 -
Lal20g1142 263 Gene3D - 45 263 IPR023214 -
Lal20g1142 263 SUPERFAMILY HAD-like 105 256 IPR036412 -
Lal20g1142 263 PIRSF VSP 1 263 IPR014403 -
Lal20g1142 263 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 7 263 - -
Lal20g1142 263 TIGRFAM plant-AP: plant acid phosphatase 47 263 IPR010028 GO:0003993
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1142 Lal-Chr20 15818338 15821160 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1142 - - gmx:547669 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1142 20 15818338 15821160 Lal20g1142 20 15818338 15821160 ECH